Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1393 ATGGGAATGATGAGCTTGATGGTTGCACTTAACTTGATGCAATCTGATGCGGATAAAAATTTGGCTCATGATCATGCACAAGTTGTGCCTATGACACTCTTTGTAGCTGTTCTTTGCTTATGTTTGGTCATTGGTCATTTGCTTGAAGAAAGTCGATGGATTAATGAATCCATTGTCGCCATTTTTGTTGGACTCATTGCTGGAATGATACTCTTGTTAGTCACTAAGGGGAAGAGTTCTCACATCCTTACATTTGATGAAGAATTATTCTTCATCTATCTTCTTCCTCCGATAATATTCAATGCAGGGTTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTAACCATCATGCTGTTTGGTGTAATCGGTGTTTTCATTTCCACGTTTATTATCACTAGCGGCAGCTGGTTGCTGTTCCCCAAGTTGAACTTCCATAACTTGACAGTGCGAGATTATCTTGCTTTAGGAACAATTTTCTCCTCAACCGACACAGTTTGTACACTACAGGTTCTCCATCAAGACGAAACTCCTTTACTATACAGCTTAGTCTTTGGGGAAGGCGTGGTAAATGATGCAACATCAGTTGTACTCTTCAATGCGGTGCAAAAGCTTGATGTCTCAAGACTTGATAGCAAGACATTGCGTGTTATTGGTGATTTCTTGTATCTGTTCTCAACAAGCACTGTTCTTGGAGTCATTACTGGACTTCTCACAGCTTATATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTACGCGAAATTTCATTGATGATGCTAATGGCATACCTATCCTACATGTTGGCAGAGCTACTTGAACTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATATCAATGTCACATTATGCATGGCATAATGTCACTGAAATTTCAAGAATAACAACCAGGCACGTATTCGCAACAATGTCGTTTATTGCAGAAACCTTCATATTTCTTTATGTCGGTATGGATGCCCTTGACATTGAAAAGTGGAGGATGACCCATTTAAAATTTGGAAACTTGCTGGGAATTTACAGTTGCTTAATCTTCTTAATATTGCTTGGGAGGGCTGCATTTGTTTTCCCCCTCTCTGCACTTGCCAATTATATGAATAGGCGCGCTGAAGAAACACCGAGTATTACATTTGGACACCAGATAATCATTTGGTGGGCTGGCCTAATGAGGGGAGCCGTCTCCATTGCTTTGGCTTTCAAACAGTTCACATACTCAGGGGTTACTTCTGATCCGGTTAATGCGACAATGATTACCATCACCATTATTGTTGTTCTTTTTACCACACTGGTGTTTGGTTGTCTAACAAAACCACTTGTAAGATATCTTCTTCCACATCATGCGACAAGGGTAAATACCAACCACGAAGAATCAACCTCACCCGTCGAGGACATGAATCTACCTTTGCTATCCTTTGAGGAGTCGGCAGCAACCAACATTAGCCGTGCCAAGGAAAGTTTATCCATGTTATTTGAAAGTCCTGTGTACACCATACATTACTATTGGAGGAGATTTGATGATTCCTACATGAGACCTTTATTTGGAGGACCCCGCGCTAACCATTCAGAATGCTAG 1599 0.4059 MGMMSLMVALNLMQSDADKNLAHDHAQVVPMTLFVAVLCLCLVIGHLLEESRWINESIVAIFVGLIAGMILLLVTKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTFIITSGSWLLFPKLNFHNLTVRDYLALGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLDSKTLRVIGDFLYLFSTSTVLGVITGLLTAYILKALSFGRHSSVREISLMMLMAYLSYMLAELLELSGILTVFFCGISMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDIEKWRMTHLKFGNLLGIYSCLIFLILLGRAAFVFPLSALANYMNRRAEETPSITFGHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVNATMITITIIVVLFTTLVFGCLTKPLVRYLLPHHATRVNTNHEESTSPVEDMNLPLLSFEESAATNISRAKESLSMLFESPVYTIHYYWRRFDDSYMRPLFGGPRANHSEC* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1393 532 Pfam Sodium/hydrogen exchanger family 34 449 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g1393 532 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr3g1393 532 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr3g1393 532 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr3g1393 532 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr3g1393 532 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 30 467 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr3g1393 532 PANTHER SODIUM/HYDROGEN EXCHANGER 13 529 - -
Mtr3g1393 532 Gene3D - 150 202 - -
Mtr3g1393 532 PANTHER SODIUM/HYDROGEN EXCHANGER 13 529 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1393 Mtr-Chr3 25096240 25102034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1393 19 532 Antiporters AT5G55470 72.062 0.0 770