Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1392 ATGTCAATGTTTTCCCTACAAAACCCCAATAAGCTACTCTCATCCTCTTCAATTCCCACTCCAATTTCTCACACTACTCTCAGAAACTGTATTTCACTAAACCCTAGAAAAACCCTGCGACATCGTTTAAAGCCAGTATCATGTTCATTCGAATCAATAGACAATGCTAAGATTAAGGTTGTTGGTGTTGGTGGTGGCGGTAACAATGCTGTTAACCGCATGATTGGTTGCGGATTACAGGGTGTAGACTTTTATGCTATAAATACTGATGCTCAAGCATTGTTGCATTCTGCTGCTGAGAATCCTATAAAAATTGGAGAGCTCCTGACTCGTGGATTAGGTACTGGTGGTAATCCACTTTTGGGGGAACAAGCTGCTGAGGAATCAAAAGAAACTATTGCTAATGCTCTTCATGGCTCAGATTTAGTGTTTGTAACTGCTGGTATGGGTGGAGGCACGGGGTCTGGTGCTGCCCCAGTCGTGGCCAGGATATCAAAAGAAGCTGGTTACTTGACTGTTGGCGTTGTTACCTATCCCTTTAGCTTTGAAGGACGCAAAAGATCCTTGCAGGCTCTAGAAGCCATCGAAAGGCTGCAGCAGAATGTGGACACACTTATAGTGATTCCAAATGATCGTCTGCTTGACATAGCTGATGATCAAACGCCTCTTACGGATGCTTTCCGTCTTGCTGATGATGTTCTACGACAAGGAGTACAGGGAATATCAGACATCATAACAATACCTGGTCTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCCTCTGGTAAAAACCGTGCAGAAGAAGCTGCAGAACAAGCTACTCTGGCACCTTTAATTGGATCATCTATTCAGTCAGCTACTGGGATAGTATATAATATTACTGGAGGAAAAGACATAACTCTTCAGGAAGTGAATAGAGTTTCTCAGGTAGTAACAAGTTTAGCCGATCCTTCTGCAAATATCATATTTGGGGCTGTTGTTGACGAGCGCTACAGCGGGGAGATTCACGTGACTCTCATTGCCACCGGCTTCTCACAGTCCTTCCAAAAGATGCTACTAACAGATCCAAGGGCTGCAAAGCTTCTTGACAGATTACCTATGGGCCAAGAAAGCAAACAAACATCAACTCCGCTAAAGGCCTCAAACTTTTCATCAACAATTGCATCTAAAGCATCTCCACGAAAACTCTTCTTTTAG 1242 0.4324 MSMFSLQNPNKLLSSSSIPTPISHTTLRNCISLNPRKTLRHRLKPVSCSFESIDNAKIKVVGVGGGGNNAVNRMIGCGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKETIANALHGSDLVFVTAGMGGGTGSGAAPVVARISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIERLQQNVDTLIVIPNDRLLDIADDQTPLTDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGIVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDERYSGEIHVTLIATGFSQSFQKMLLTDPRAAKLLDRLPMGQESKQTSTPLKASNFSSTIASKASPRKLFF* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1392 413 Pfam FtsZ family, C-terminal domain 266 359 IPR024757 -
Mtr3g1392 413 Pfam Tubulin/FtsZ family, GTPase domain 57 217 IPR003008 GO:0005525
Mtr3g1392 413 Gene3D Tubulin/FtsZ, GTPase domain 49 264 IPR036525 -
Mtr3g1392 413 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 5 413 - -
Mtr3g1392 413 ProSitePatterns FtsZ protein signature 1. 88 122 IPR020805 GO:0005525
Mtr3g1392 413 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 5 413 IPR045061 GO:0003924|GO:0005525
Mtr3g1392 413 SMART Tubulin_4 57 249 IPR003008 GO:0005525
Mtr3g1392 413 Gene3D - 265 370 IPR037103 -
Mtr3g1392 413 ProSitePatterns FtsZ protein signature 2. 141 162 IPR020805 GO:0005525
Mtr3g1392 413 PRINTS Cell division protein FtsZ signature 142 162 IPR003008 GO:0005525
Mtr3g1392 413 PRINTS Cell division protein FtsZ signature 170 191 IPR003008 GO:0005525
Mtr3g1392 413 PRINTS Cell division protein FtsZ signature 233 255 IPR003008 GO:0005525
Mtr3g1392 413 PRINTS Cell division protein FtsZ signature 256 277 IPR003008 GO:0005525
Mtr3g1392 413 CDD FtsZ_type1 73 358 IPR000158 GO:0003924|GO:0005525
Mtr3g1392 413 TIGRFAM ftsZ: cell division protein FtsZ 52 365 IPR000158 GO:0003924|GO:0005525
Mtr3g1392 413 SUPERFAMILY Tubulin C-terminal domain-like 251 365 IPR008280 -
Mtr3g1392 413 Hamap Cell division protein FtsZ [ftsZ]. 53 396 IPR000158 GO:0003924|GO:0005525
Mtr3g1392 413 SUPERFAMILY Tubulin nucleotide-binding domain-like 56 252 IPR036525 -
Mtr3g1392 413 SMART Tubulin_C_4 251 368 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1392 Mtr-Chr3 25091250 25095294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1392 145 353 PP2C-type Phosphatase Gene Family AT1G75010 22.374 1.81e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1392 K03531 - gmx:100809043 643.269