Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1391 ATGGGTTTCTTGATAACGACACTGATTTTTGTTGTGGTTGGAATCATCGCATGTCTCTGTACCAGAATTTGTTGCAACAGAGGACCTTCTGCTAATCTATTTCACCTAACTCTGGTCATTACTGCGACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTGGCACAAATGAAACCACTCATAGTACCTATACTAAGTGAAGGCGAATAA 213 0.4038 MGFLITTLIFVVVGIIACLCTRICCNRGPSANLFHLTLVITATICCWMMWAIVYLAQMKPLIVPILSEGE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1391 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Mtr3g1391 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 70 - -
Mtr3g1391 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 70 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1391 Mtr-Chr3 25086735 25089905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1391 1 70 Primary Pumps ATPases(2) AT5G55290 88.571 9.64e-41 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1391 K02153 - gmx:100527598 146.747