Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1376 ATGGCAGATATTGTTATCACAACTGTTGCTAAAGTTTCTGAATATATTATTGGACCGGTAATACGCGAAGGAAAATACTTTCTTTGTGTCGGTAAAATTATCAAAGATATTGAAAATGAAATAAATGAGTTGATATTTGAAAGGGATAACTTGTTGGATCGAGTTGAACAAGCCAAGCAAAGAACTGAAATTATCGAGAAACCTGTGGAAAAGTGGCTACATGATGTGCAGAGCCTACTAGAAGAGGTGGAAGAATTAGAACAAAGGATGAGAGCAAACACCAGTTGCTTTCGAGGAGAATTTCCAGCATGGAGAAGATATCGTATCAGACGGAAAATGGTAAAGAAGGGAGAGGCATTGGGAAAATTAAGATGCAAAAGTGATATTCAACCATTTTCTCATTATGCTCCTCTTCCAGGCATTCAATACCAGTCGTCCGAGAATTTTACTTACTTCCAATCAACAAAAGCGGCTTACAATCAGCTCTTGGAGTTACTAAATGATGATTGCATCTATATGATAGGTGTGTATGGAATGGGTGGATGTGGGAAAACAACACTTGTAACCGAAGTCGGTAAGAAGGCTCAGGAATCAAATATGTTCGATAAGGTAATATCTATCACAGTGTCTCAAACTCAAAATATTAGAGACATTCAAGGAAAAATGGCAGACATGTTAAACTTGAAACTCAAGGAAGAAAGCGAAGAGGGAAGAGCACAACGGTTGTGGTTGAGTTTGAAAGAAAATAAACGAATTCTTGTTATAATTGATGATTTATGGAAAGAGTTTAATTTGATGAATATAGGGATTCACATAGACAATGTTAACAAGGGCGCATGGAAAATCCTTGTAACCACTCGTAATCAGCAAGTATGCACTTTAATGGACTGTCAAAAGAATATTCACCTGGCGCTCTTATCTAAAGATGAATCCTGGACTTTGTTCCAAAAGCATGCAAAGATTACTGACAAGTTTTCCAAGTCAATGGATGGTGTGCCACGAGAACTCTGCGATAAATGTAAGGGACTGCCCCTAGCTATTGTAACTATGGCGTCTTGCTTAAAAGGAAAGCATAAAAGTGAGTGGGATGTTGCACTACATAAGATGAGGAATTCATCAGCATTTGATGATCACGATGAAGGAGTGAGAAATGCTTTGAGTTGTCTTGAACTAAGCTATAAATATTTACAAAACAAGGAAGCAGAGTTGCTCTTTTTGTTGTGTTCTATGTTTCCAGAAGATTGCAACATATCAATCGATGATTTAATCCTATATGCAATAGGACTAGGTGTGGGAGGAAGATCTCCACTGAAGTTATCAAGGAGTTTGGTTCAAGTCGGCATAAACAAGCTTTTAGAATCATGTTTGCTGATGCCGGCTAAAGACATGCAATGCGTGAAGATGCATGACTTGGTTCGTGAAGTGGCCATATGGATAGCAAAGAGGTCAGGGAATCAAAAAATTTTGCTAAATGTTGACAAACCTCTCAACACCTTGGCAGGGGACGATAGTATGCAAAATTATTTTGCGGTATCATCATGGTGGCACAATGAAATTCCAATTATTGGTTCATTGCAGGCTGCAAACCTTGAAATGTTGTTGCTACACATAAATACCAGTATATCACAAAGTTCCTTTGTTTTATCAAATTTAACATTTGAAGGAATAGAAGGGCTCAAGGTATTTTCTCTAACCAATGATTCCAATAGTGAAGTACTATTCTCATTGCCTCCATCAATCCAAATGTTGACAAATGTTCGAACTCTGCGCTTGAATGGGTTGAAGTTGGGTAACATTTCTTTTATAGCAAGCTTAACAAGGCTCGAGGTTCTTGACTTGCGACATTGTGACTTCAATGAACTTCCATGCGAAATAGGTAGCCTCACAAGACTGAAGCTACTAGATTTGTCAAGATGTCATTTTTATCAACAAACCTATAATGGTGCAGTTGGGAGATGTTCACAACTAGAAGCATTATACGTTTTGCCACGCAACACTGTACAATTTGTTCTTGAGATCATTCCTGAGATCGTTGTAGATATTGGTTGTCTCTCAAAGTTGCAGTGTTTTTCAATTCATGATTCTTTGGTTCTACCTTATTTTAGTAAAAGGACAAGATCTCTAGGATTAAGGGATTTTAATATTTCCACATTAAGGGAATCCAAAGGGAATATTCTACAAATATCTGAAAATGTTGCTTTTACACGCCTCCATGGAGGATGTAAAAATATCATCCCAGACATGGTTGAAGTTGTGGGAGGCATGAATGATTTAACTTCTCTATGGCTTGATGAATGCCCAGAGATAGAATGCATCTTTGATATAACCTCTAATGGCAAGATAGATGATTTGATTCCCAAGTTTGTCGAGTTACGCCTTCGGTTTATGGATAACTTGACAGTGTTGTGTCAAGGTCCAATTCTTCAAGTGCAATGCTTCTTTGATAAACTAGAAGAACTTGTAATTTATCATTGCAAGAATTTACGCATCACATTTCCACGGGAATGTAACTTGCAGAATCTCAAGATCCTCAGTTTAGAGTATTGCAAGTCTGGTGAAGTACTCTTTCCGAAATCTGTTGCTCAAAGTCTGCAACAATTAGAACAACTGAAAATACGTAATTGCCATGAATTGAAGCTTATAATTGCTGCAGGTGGAAGAGAGCATGGTTGTTGTAATCCAACAAGTACTCATTTTCTCATGTCTAGTCTAAGGGAAGTTACGATTCTGGATTGTCCGATGTTAGAGTCGATATTCCCCATCTGCTATGTCGAAGGACTTGCAGAGCTGAAACGGATACATATAGCAAAAGGTCATGAGCTGAAATATATATTTGGTGAATGTGATCATGAACATCATTCATCTCACCAATACCTGAACCACACCATGCTTTCTCAACTGGAAGTTCTCAAACTCAGTTCTCTTGACAATCTCATTGGGATGTGTCCTGAATACTGTCATGCGAAGTGGCCATCTCACTCTTTGAGGGATCTTGTTGTGGAGGATTGTCCCAAATTGGATATGTCGTGGATCGCTCTTATGATTCGTTCTGGTCATAGTCAGCATCGTTTAAATGAAAACTTGCCCTTAAAACTGGAGTTGTATTTACATGTTTTGCCTCAGTTGAAATCCATATCATGGCAGGATCCTACAGCTCCAAGACAGATATGGAGTCTCCAATGTCTCCAGTATTTAAAAGTAGGTGATTGTGAAAATTTGAAATCTTTGTTCTCCATGAAGGAATCTAGAAGTCTACCAGAGTTGATGTCCATTTCTATTTACAACTCCCAAGAATTGGAACACATTGTTGCAGAAAATGAAGAACTTGTGCAGCAACCTAATGCTGAAGTCTATTTCCCAAAGCTAGCACATGTAGAAGTCAAAAGATGCAACAAGTTGAAAAGCCTTTTCCCTGTTGCTATGGTTAAAATGCTTCCGCAATTAAGCACTCTTCACATTTTCGACGCTACTCAATTTGAAGAGGTTTTTAGAAATGGCGGTGGAGACAGAACTGTAAATGAAATGGAAGTTGTTCTTATTCTTCCAAACTTGACAGAGATAACGCTCAACTTTTTACCGAGTTTTGTTCATATCTGCCAGGGTTGTAAGTTACAGGCTGTGAAACTTCAACAAATCAACATATATGAATGCCCCAAAATTGCTCCAAGTGTGAAAGAAATTCAGGTAAGGAGAAGATCCATCAATGCACAATGA 3714 0.3813 MADIVITTVAKVSEYIIGPVIREGKYFLCVGKIIKDIENEINELIFERDNLLDRVEQAKQRTEIIEKPVEKWLHDVQSLLEEVEELEQRMRANTSCFRGEFPAWRRYRIRRKMVKKGEALGKLRCKSDIQPFSHYAPLPGIQYQSSENFTYFQSTKAAYNQLLELLNDDCIYMIGVYGMGGCGKTTLVTEVGKKAQESNMFDKVISITVSQTQNIRDIQGKMADMLNLKLKEESEEGRAQRLWLSLKENKRILVIIDDLWKEFNLMNIGIHIDNVNKGAWKILVTTRNQQVCTLMDCQKNIHLALLSKDESWTLFQKHAKITDKFSKSMDGVPRELCDKCKGLPLAIVTMASCLKGKHKSEWDVALHKMRNSSAFDDHDEGVRNALSCLELSYKYLQNKEAELLFLLCSMFPEDCNISIDDLILYAIGLGVGGRSPLKLSRSLVQVGINKLLESCLLMPAKDMQCVKMHDLVREVAIWIAKRSGNQKILLNVDKPLNTLAGDDSMQNYFAVSSWWHNEIPIIGSLQAANLEMLLLHINTSISQSSFVLSNLTFEGIEGLKVFSLTNDSNSEVLFSLPPSIQMLTNVRTLRLNGLKLGNISFIASLTRLEVLDLRHCDFNELPCEIGSLTRLKLLDLSRCHFYQQTYNGAVGRCSQLEALYVLPRNTVQFVLEIIPEIVVDIGCLSKLQCFSIHDSLVLPYFSKRTRSLGLRDFNISTLRESKGNILQISENVAFTRLHGGCKNIIPDMVEVVGGMNDLTSLWLDECPEIECIFDITSNGKIDDLIPKFVELRLRFMDNLTVLCQGPILQVQCFFDKLEELVIYHCKNLRITFPRECNLQNLKILSLEYCKSGEVLFPKSVAQSLQQLEQLKIRNCHELKLIIAAGGREHGCCNPTSTHFLMSSLREVTILDCPMLESIFPICYVEGLAELKRIHIAKGHELKYIFGECDHEHHSSHQYLNHTMLSQLEVLKLSSLDNLIGMCPEYCHAKWPSHSLRDLVVEDCPKLDMSWIALMIRSGHSQHRLNENLPLKLELYLHVLPQLKSISWQDPTAPRQIWSLQCLQYLKVGDCENLKSLFSMKESRSLPELMSISIYNSQELEHIVAENEELVQQPNAEVYFPKLAHVEVKRCNKLKSLFPVAMVKMLPQLSTLHIFDATQFEEVFRNGGGDRTVNEMEVVLILPNLTEITLNFLPSFVHICQGCKLQAVKLQQINIYECPKIAPSVKEIQVRRRSINAQ* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1376 1237 Pfam NB-ARC domain 160 394 IPR002182 GO:0043531
Mtr3g1376 1237 Gene3D Ribonuclease Inhibitor 1052 1233 IPR032675 -
Mtr3g1376 1237 Gene3D Ribonuclease Inhibitor 517 1004 IPR032675 -
Mtr3g1376 1237 SUPERFAMILY RNI-like 1046 1219 - -
Mtr3g1376 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 402 IPR027417 -
Mtr3g1376 1237 SUPERFAMILY L domain-like 467 948 - -
Mtr3g1376 1237 Gene3D - 305 391 IPR042197 -
Mtr3g1376 1237 Coils Coil 34 61 - -
Mtr3g1376 1237 Gene3D - 142 302 IPR027417 -
Mtr3g1376 1237 Gene3D - 392 477 IPR036388 -
Mtr3g1376 1237 PRINTS Disease resistance protein signature 173 188 - -
Mtr3g1376 1237 PRINTS Disease resistance protein signature 246 260 - -
Mtr3g1376 1237 PRINTS Disease resistance protein signature 340 354 - -
Mtr3g1376 1237 PRINTS Disease resistance protein signature 626 642 - -
Mtr3g1376 1237 PANTHER - 1037 1219 - -
Mtr3g1376 1237 PANTHER - 8 1005 - -
Mtr3g1376 1237 Coils Coil 69 96 - -
Mtr3g1376 1237 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 8 1005 - -
Mtr3g1376 1237 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1037 1219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1376 Mtr-Chr3 24937780 24943231 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1376 171 486 WRKY Transcription Factor Family AT5G45050 24.768 4.04e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1376 - - mtr:MTR_3g055210 1575.45