Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1329 ATGGCAAATATTTTTGTGACTATTGCAACTAATGTGGGTCAATATTTGGCGGGACCAGCAATTCGCGAAGTTCAATACCTTCTTTGTGTTAATAACACAATCAATGATCTTGAGAAAGAAAAGGAAGCACTGACATCTGAAAGAGATAACTTGCTAATTCGTGTTGAACGAGCCAAAGAGAGAACTGAAGTAATTGAAAAACCAGTGGAGAAGTGGCTGAATGATGTGGAAAAACTCCTTAGAGAGGTGGAGGTTCTTGTACAAAGGACGGAGACAGACAACAATTGCTTCCAAGGATGGTTTCCAACGTGTGGACGATATCTTTTGTGCAAACAAATGGTGCAGAAGATAGACGCAATGGGGAGGTTCAAAGGCAAAAGCAAAGATATCGAACCATTTTCTCATCTTGCTCCACTACCAGGTATTCTGTATCAGTCATCCGAAGACTTCATCTATTTTGAATCAACAAAAGTGGCTTATGATAAACTCTTGAAGGCACTTGAGGATGATCGCATCTCTATAATTGGACTGTACGGAATGGGTGGATGTGGAAAAACAACCCTTGTAACGGAAGTTGGCAAGAAGGCTGAGGAATTGGATATGTTTGATAAGGTTATATCAATCACCGTGACAAGAACTCCAAACATTAGGAGCATTCAAGGACAAATTGCAGATATGTTAAACTTGAAATTGGGGGAAGAAAGTGAAGATGGAAGAGCACAACGTCTATGGTTGCGTTTAAAAGAAATGAAGAGAACTCTTATAATAGTTGACAATCTATGGAGAGAGTTTCATTTGAAGGATACAGGGATTCGCTTATACAATGATAATAGAGGTGCATTGAAAATCCTTGTAACCACACGTATTGAGAATGTTTGTATTTTAATGAATTGTCACAAGATGATTCATTTGGGGCTCTTGTCCAAAGATGAATCCTGGACATTCTTCCAAAAGCTTGCAGTAATTGATGACGAATTCTCTGTGTCATTAGATGGTGTACCACAAGAAATCTGCTATGAATGCAAGGGACTTCCCTTAGCAATCAAAACTATGTCTTCTTCCTTAAAAGGAAAGGATAATAATGAGTGGAATTCAACATTAGCTAAGTTGATGGTTTCAAAGGCATCTGATGATCATGAAGGAGGAGAGAGCGATGCTTTAAATTGTATCAAGTCCAGCTATGAGTGTTTACAAAATAGAGAAGCAGAACAGATATTTCTGATGTGCTGTATGTTTCTTGAAGACTATCACATCCCAGTAGAAGATTTGTTGAGGTATGAAATTGGAGTAGGTGTAGGAAGAACATACTCATTGCAGTTAAGGAGGAGCATGTTCCAAGCACACATAAACAAACTTCTGGATTCTCGTTTGCTGATGCATGGTAGCGTGAAGATGCATGACATGGTTCGCGACACAGCCTTATGGATCGCAAATAGATCAAATAATTGTAAAATCTTGGTAAATGTTGACAAACCACTCAGCATTGTGGCAGAAGATAAAAATATAAGAGATTGTTTTGCAGTATCTTCATGGTGGGAGAATAAAAATCCCTTTTTTTGTCCATTGCATGCTCCTAATCTTAAAATGCTATTGCTAAATATAAGTGCTCGTCCATCATTGAATTCCTTGGATTTATCGCATTTAACATTTGAAGGAATACAAGGGCTTGAGGTATTTTCTTTAACCGTTGATTACAGAGTAGTACCAATATCATTTTCTCCATCAATCCAACTGTTGAAAAATGTTCGAACTTTGCGCTTAAATGGATTGAACTTTGGTGACATTTCTGTCATTGGAAGCTTAACAAGCCTTGAGGTTCTTGACTTGAGACGTTGTAACTTCAATGAACTTCCTATCGAAATAGGAAAACTAATAAGCCTTAAGTTGCTGGATTTATCAGAGTGTCGTATTTCTGAAAACAACTATAATGGAGCAATAGGGAAATGTTCACAACTAGAGGAGTTATATGCTTCAACATGTTACCCAGAAAAGTATGTTCATGAGATCATTATTGATATTGGTATTCTCTCAAATCTACAAAGGTTTGTATTTGACAATCAAATCCTTCAGGAAATAAGGAGAGTTCTAAAATTAAAAGATTTTAATATCTCAAAGTTGAGGACATCTAAGAAAAATATTCTGCAAATAGCTGAAAATATTTCTTTGGAAGGGCTTCATGGAGGATGTAAAAATATAATCCCAGATATGGTTGGAATTGTGGGAGGCATGAATGATTTGACTTCTCTCCATCTTACAAGTTGCCAAGAAATAGAATGTATCTTCGATGCAACCTATGATTTCAAGGAAGATGATTTGATTCCCAGGTTGGGGGAGTTACGCCTTCGGCATATGAATAACTTGACAGAATTGTATCGAGGTCCATCTCTTCAAGTACTACGCTACTTTGAGAAACTAGAACTGGTTGATATACAATATTGTTGGCAGGTACACATCATGTTTCCACTGGAATGTAAGTTACGAAATCTTAAGATTCTCAGCTTATCAAATTGCAGGACCGATAAAGTACTCTTCTCAGAATCTGTTGCTCAAAGTATGCTGCAACTAGAACAACTAAACATCAGTGGGTGCTATGAATTGAAGCATATAATTGCTGCTAGTGGAAGCCAACATGGTGGTAGTAATACAAGTGAGGAAATAAGTCCAGCTCCAATGAATTCTCATTTTTTGATGACCAAACTAAGGGATGTTAACATTTCTGATTGTCCAAGTTTAGAGTCAATATTCCCAATTTGTTATGTTGAAGGACTTACACAATTGCAACAGATGGAGATAGAAGATTCTCCTAAGCTGGAATACGTGTTTGGTAAATGTGATCACAAAGAACACCTTTCATCAAACCATGTCACGCTTCCTCATTTGGAAGCTCTCCGACTCTCTTCTCTTGAAAATCTCATTGGGATGTTTCCTGAGAATTGTCAAGCAAACTGGTCATCTCAATGTCTGAGGATGCTAAACATATATCATTGTCCAAAGATGGCTATACCATGGTTCAATTTGAAGGTTGGCTATGATCAAAGTCAACATCATCCGAATGAAAGATTACTCTCAAAACTGCAAGAGCTGGAATTGTGTGATCTGCCTCAATTGTACTCCATTTCATGGGTAGGTCCTACTCCGAGTCAGATTTGGAGTTTTCAATGTCTTCAGAGTTTAACAGTGAAAAGTTGTGAAAATTTGAAATTCTTGTTTTCCATGGGGGTATGTAGAAGCCTACCAGAGTTGATTAGCCTTGTTATTGAGAACTGCCAAGAATTGGAACAAGTAGTTGTAGAAGATGAAGAACTTCTGCAGCTTCCTGATGCTGAATTTTATTTTCGTAAGCTAAAACAAATAGGAGTCTTTAGCTGCAACAAGTTGAAAAGCCTTTTCCCTTTTGCCATGGTTACAATGCTTCCACAATTAAGTTCTCTTTTCTTAGCATATGCTACTCAACTTCAAGAGGTTTTTAGACATAGTAGTGGAGACAACGTTATGAATGAAATGGAAATTGTTCTTCCAAACTTGACCAAGATATTTTTGTCTGAACTACCAAATTTTGTAGATATCTGCCATGGTTGTAAGTTACATGCCCCTAAACTTCTAAAACTCAGCATATCTTTCCTTGACCGAACTCCTCCAAGCTTAATAAAAATTCAGAGGAAACTGCAAGAGGAAGCAGGATCAGGAGATGGTGAAGATTTTCATTCTTTGGTTTTTAAGAATGATGAAGATTCTCAATTTCGGTCAACTTCAAGCATAAGTGATTATGTGAAAGATCCATCCGTACCCAACTTGGCAGTGGGACAAAGGAAAAACAAAGTATATTGTTGA 3831 0.3738 MANIFVTIATNVGQYLAGPAIREVQYLLCVNNTINDLEKEKEALTSERDNLLIRVERAKERTEVIEKPVEKWLNDVEKLLREVEVLVQRTETDNNCFQGWFPTCGRYLLCKQMVQKIDAMGRFKGKSKDIEPFSHLAPLPGILYQSSEDFIYFESTKVAYDKLLKALEDDRISIIGLYGMGGCGKTTLVTEVGKKAEELDMFDKVISITVTRTPNIRSIQGQIADMLNLKLGEESEDGRAQRLWLRLKEMKRTLIIVDNLWREFHLKDTGIRLYNDNRGALKILVTTRIENVCILMNCHKMIHLGLLSKDESWTFFQKLAVIDDEFSVSLDGVPQEICYECKGLPLAIKTMSSSLKGKDNNEWNSTLAKLMVSKASDDHEGGESDALNCIKSSYECLQNREAEQIFLMCCMFLEDYHIPVEDLLRYEIGVGVGRTYSLQLRRSMFQAHINKLLDSRLLMHGSVKMHDMVRDTALWIANRSNNCKILVNVDKPLSIVAEDKNIRDCFAVSSWWENKNPFFCPLHAPNLKMLLLNISARPSLNSLDLSHLTFEGIQGLEVFSLTVDYRVVPISFSPSIQLLKNVRTLRLNGLNFGDISVIGSLTSLEVLDLRRCNFNELPIEIGKLISLKLLDLSECRISENNYNGAIGKCSQLEELYASTCYPEKYVHEIIIDIGILSNLQRFVFDNQILQEIRRVLKLKDFNISKLRTSKKNILQIAENISLEGLHGGCKNIIPDMVGIVGGMNDLTSLHLTSCQEIECIFDATYDFKEDDLIPRLGELRLRHMNNLTELYRGPSLQVLRYFEKLELVDIQYCWQVHIMFPLECKLRNLKILSLSNCRTDKVLFSESVAQSMLQLEQLNISGCYELKHIIAASGSQHGGSNTSEEISPAPMNSHFLMTKLRDVNISDCPSLESIFPICYVEGLTQLQQMEIEDSPKLEYVFGKCDHKEHLSSNHVTLPHLEALRLSSLENLIGMFPENCQANWSSQCLRMLNIYHCPKMAIPWFNLKVGYDQSQHHPNERLLSKLQELELCDLPQLYSISWVGPTPSQIWSFQCLQSLTVKSCENLKFLFSMGVCRSLPELISLVIENCQELEQVVVEDEELLQLPDAEFYFRKLKQIGVFSCNKLKSLFPFAMVTMLPQLSSLFLAYATQLQEVFRHSSGDNVMNEMEIVLPNLTKIFLSELPNFVDICHGCKLHAPKLLKLSISFLDRTPPSLIKIQRKLQEEAGSGDGEDFHSLVFKNDEDSQFRSTSSISDYVKDPSVPNLAVGQRKNKVYC* 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1329 1276 Pfam NB-ARC domain 161 376 IPR002182 GO:0043531
Mtr3g1329 1276 Coils Coil 27 61 - -
Mtr3g1329 1276 CDD AAA 159 301 - -
Mtr3g1329 1276 Gene3D Ribonuclease Inhibitor 516 767 IPR032675 -
Mtr3g1329 1276 Gene3D - 143 303 IPR027417 -
Mtr3g1329 1276 PRINTS Disease resistance protein signature 174 189 - -
Mtr3g1329 1276 PRINTS Disease resistance protein signature 247 261 - -
Mtr3g1329 1276 PRINTS Disease resistance protein signature 341 355 - -
Mtr3g1329 1276 PRINTS Disease resistance protein signature 622 638 - -
Mtr3g1329 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 409 IPR027417 -
Mtr3g1329 1276 Gene3D Ribonuclease Inhibitor 947 1224 IPR032675 -
Mtr3g1329 1276 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 896 1000 - -
Mtr3g1329 1276 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1023 1204 - -
Mtr3g1329 1276 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 11 869 - -
Mtr3g1329 1276 SUPERFAMILY L domain-like 464 865 - -
Mtr3g1329 1276 Gene3D Ribonuclease Inhibitor 774 946 IPR032675 -
Mtr3g1329 1276 PANTHER - 896 1000 - -
Mtr3g1329 1276 PANTHER - 1023 1204 - -
Mtr3g1329 1276 PANTHER - 11 869 - -
Mtr3g1329 1276 SUPERFAMILY RNI-like 737 1146 - -
Mtr3g1329 1276 Coils Coil 69 93 - -
Mtr3g1329 1276 Gene3D - 306 397 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1329 Mtr-Chr3 24329460 24335091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1329 172 869 WRKY Transcription Factor Family AT5G45050 21.710 4.11e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1329 - - mtr:MTR_3g053200 2503.4