Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1328 ATGGCAAATATTGTTGTGACTGTTGCAACTAATGTGGGTAAATATTTGGGGGGACCAATATTCCGCGAAGTACAATACTTTCTTTGTGTTAATAATGTAATCAATGATCTTGAGACTGAAAAGGAGGCGCTGACATCTGAAAGAGACAATTTGTTGATTCGCGTTGCACAAGCCTTGGAGAAAACTGAAATAATTGAAAAACCAGTGGAGAAGTGGTTGATTGTTGTAGAAAATCTCTTGAGAGAGGTGGATGTTCTTGTGCAAAGGACAGAAACAGACGCCAATTGCTTTCAAGGATGGTTTCCAACGTGTGGACGGTATCTTTTGTGCAAGCAAATGGTACAAAAGATAGATGCGATGGGGAAATACAAAGGTAAAAGCATTGATATTCAACCATTTTCTCATCGTGCTCCACTACCAGGTAGCAGGTATCGGTCATTTGAAGAATTCATTTATTTTGAATCAACAAAGGTGGCTTACAATCAACTATTGGAGGCACTTAAGGATGATTGCATCTCTATAATAGGAATGTATGGAATGGGTGGATGCGGAAAAACAACCCTTGCAGCAGAAGTTGGCAAGAAGGCTGAGGAATTAGATATGTTTGATAAGGTTATATCAATCACTGTCGCTCAAACTCCAAATATTAGAGGCATTCAGGGAAAACTTGCAGATATGTTAAACTTGAAATTGGAGGAAGAAAGTGAAGAGGGAAGAGCACAACGTTTATGGTTGTGTTTAAAACAAAAGAAGCGAATTCTTATAATAGTGGACGATCTATGGAGAGAGTTTCATTTGATAAATATAGGGATTCTCGTAGACAATGTTAACGAGCACACATGGAAGGTCCTGATAACCACTCGTAATGAGCATGTCTGTACATCAATGGACTGTCAAAAGAAGATTCATTTGGGGCTCTTGTCTGAAGATGAATCTTGGACATTATTCCAAAAGTTTGCAAGAATTGATGACGAATACTCCAAGTTATTGGATGGTGTGCCACGGGAAGTCTGCAATGAGTGTAATGGACTTCCCTTATCAATCAAAACTATAGGGTCGTCCTTAAAAGGAAGGCATGAAATTGAGTTGTGGCAGCAGGCGTTAGATAAGTTGAGGGATTCAAAGGCATCCAATGATGAAGGAGGAGTGAGGACTACTTTAAGTTGCCTTAAATTAAGCTATGATTATTTGCAAAGGCAGTACACACAGCTACTCTTAATGATTTGTACTCTTTTTCCAGAAGACTATCACATCCCAACAGAAGATTTGATGAGGTTTGCATTTGGACTAGGTATGGGAGAAAAATTATCATTACAGTCAATGAGGAGCTTGATTCAAGCAGACATAAACAAACTCTTCGATTCTTGTTTGTTCACGCCTGGTTCTGTGAAGATGCATGGCATGGTTCGTGAGACAGTCTTATGGATTGCAAATACATCAGATAATTGCAAAATCTTGGTAAATGTTGACAAACCACTTAGCACTTTAGCAGAGGATAACAAAATAAGAGAATGTTTTACATTATCCTCATGGTGGTATAATGAAAATCCCACCTTTTGTCAATTGCATGCTCCAAATCTTAAAATGTTATTGGTAAATATAAGTGCTCGTGAATCATTGAATTTCTTGGATTTATCACATTTAACATTTGAAGGAGTACAAGGGCTTGAGGTACTTTCAATAACCATTGATAACAAAATAGTACCAGTATCATTTTCTCCATCCATCCAGTTGTTGACAAATGTTCGAACTTTGCGCTTAAATGGATTGAAATTGGATGACATTTCTTTCATCGGAAGCTTAACAAGCATTGAGGTTCTTGACTTGAGACGTTGTCACTTCAATGGACTTCCTATCGAAATAGGAAAACTCATAAGTCTTAAGTTGCTAGATTTGTCAGAATGTCGTATTTCTCGAAACAGCTATAATGGAGCAATAGGGAAATGTTCACAACTAGAGGAGTTATATGCTTCAGCATGTTACCCAGAAAAGCATGTTCCTGAGATCATTCTGGATATTGGTATTCTCGTAAATCTACAAAGCTTTGTACTTGATGATCAAATCCTTCAGGAAAGAAGGAGAGTCCTACGAGTAAAAGGTTTTAATACATCAAGGTTGAAGACATCTAAGAAAAATATTCTGCAAATAGCTGAAGTTATTTCTTTGGAAGCTCTTCATGGAGGATGTAAAAATATTATCCCAGATATGGTTGGAGTTGTAGGAGGCATGGATGATTTGACTTCTCTCCATCTTACAAGATGCCAAGATATAGAATGCATCTTCGATGCAACCTATGATTTCAGGGAAGATGATTTGATTCCCAGGTTGGGGGAGTTACGCCTTCGGTCTATGAATAACTTGACAGAATTGTATCGAGGTCCATCTCTTCAAGTACTACACTACTTTGAGAAACTAGAACTGGTTGACATACAAGATTGCAGGAAGTTACACATCATGTTTCCATTGGAATGTAAGTTACGAAATCTTAAGATCCTCAGCTTATCATATTGCAGGACCGATGAAGTACTCTTCTCAGCATCTGTTGCTCAAAGTTTGCAGCAACTAGAACAACTAAAAATCAGTGGGTGCTATAAATTGAAGCATATAATTGCTGCTAGTGGAAGGCAACATGGTGGTAGTAATACAAGTGAGGAAATAAGTCCAGCTCCAATGAATTCTCATTTTTTGATGACCAAATTAAGGGATGTTAACATTTCTGATTGTCCAAGGTTAGAGTCGATATTCCCGATTTGTTATGTTGAAGGACTTACACAATTGCAACAGATGGAGATAGGATATTCTCCTAAGCTGGAATACGTGTTTGGTAAATGTGATCACAAAGAACACCTTTCATCACACCATGTCATGCTTCCTCATTTGGAAGTTCTCGGACTCTCTTCTCTTGAAAATCTCATTGGGATGTGTCCAGAGAATTGTCAAGCAAACTGGTCATCTCAATGTCTGAGGATGCTAAACATATATAATTGTCCAAACATGGCTATACCATGGTTCAATTTGAAGGTTGGCTATGATCAAAGACAACATCATCCGAATGAAAGCTTACTCTCAAAACTGCAAGAACTGGTATTGTATGATCTGCCTCAATTGCACTCCATTTCATGGGTAGGTCCTACTCCAAGTCAGATTTGGAGTTTCCAATGTCTTCAGCGTTTAAGAGTGGACAGTTGTGAAAATTTGAAATACTTGTTCTCCATGGAGATATCTGCCATGGTTGTAAGTTACATGCTGATAAGCTTCTACAACTCCACATATATGACTGCCCCAAAACTGCTTCAAGCTTAA 3303 0.3815 MANIVVTVATNVGKYLGGPIFREVQYFLCVNNVINDLETEKEALTSERDNLLIRVAQALEKTEIIEKPVEKWLIVVENLLREVDVLVQRTETDANCFQGWFPTCGRYLLCKQMVQKIDAMGKYKGKSIDIQPFSHRAPLPGSRYRSFEEFIYFESTKVAYNQLLEALKDDCISIIGMYGMGGCGKTTLAAEVGKKAEELDMFDKVISITVAQTPNIRGIQGKLADMLNLKLEEESEEGRAQRLWLCLKQKKRILIIVDDLWREFHLINIGILVDNVNEHTWKVLITTRNEHVCTSMDCQKKIHLGLLSEDESWTLFQKFARIDDEYSKLLDGVPREVCNECNGLPLSIKTIGSSLKGRHEIELWQQALDKLRDSKASNDEGGVRTTLSCLKLSYDYLQRQYTQLLLMICTLFPEDYHIPTEDLMRFAFGLGMGEKLSLQSMRSLIQADINKLFDSCLFTPGSVKMHGMVRETVLWIANTSDNCKILVNVDKPLSTLAEDNKIRECFTLSSWWYNENPTFCQLHAPNLKMLLVNISARESLNFLDLSHLTFEGVQGLEVLSITIDNKIVPVSFSPSIQLLTNVRTLRLNGLKLDDISFIGSLTSIEVLDLRRCHFNGLPIEIGKLISLKLLDLSECRISRNSYNGAIGKCSQLEELYASACYPEKHVPEIILDIGILVNLQSFVLDDQILQERRRVLRVKGFNTSRLKTSKKNILQIAEVISLEALHGGCKNIIPDMVGVVGGMDDLTSLHLTRCQDIECIFDATYDFREDDLIPRLGELRLRSMNNLTELYRGPSLQVLHYFEKLELVDIQDCRKLHIMFPLECKLRNLKILSLSYCRTDEVLFSASVAQSLQQLEQLKISGCYKLKHIIAASGRQHGGSNTSEEISPAPMNSHFLMTKLRDVNISDCPRLESIFPICYVEGLTQLQQMEIGYSPKLEYVFGKCDHKEHLSSHHVMLPHLEVLGLSSLENLIGMCPENCQANWSSQCLRMLNIYNCPNMAIPWFNLKVGYDQRQHHPNESLLSKLQELVLYDLPQLHSISWVGPTPSQIWSFQCLQRLRVDSCENLKYLFSMEISAMVVSYMLISFYNSTYMTAPKLLQA* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1328 1100 PANTHER - 10 998 - -
Mtr3g1328 1100 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 10 998 - -
Mtr3g1328 1100 SUPERFAMILY L domain-like 464 867 - -
Mtr3g1328 1100 Gene3D Ribonuclease Inhibitor 818 944 IPR032675 -
Mtr3g1328 1100 Gene3D Ribonuclease Inhibitor 945 1078 IPR032675 -
Mtr3g1328 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 407 IPR027417 -
Mtr3g1328 1100 Gene3D Ribonuclease Inhibitor 523 700 IPR032675 -
Mtr3g1328 1100 Gene3D - 306 398 IPR042197 -
Mtr3g1328 1100 Pfam NB-ARC domain 161 395 IPR002182 GO:0043531
Mtr3g1328 1100 PRINTS Disease resistance protein signature 174 189 - -
Mtr3g1328 1100 PRINTS Disease resistance protein signature 247 261 - -
Mtr3g1328 1100 PRINTS Disease resistance protein signature 341 355 - -
Mtr3g1328 1100 PRINTS Disease resistance protein signature 622 638 - -
Mtr3g1328 1100 Coils Coil 34 61 - -
Mtr3g1328 1100 SUPERFAMILY L domain-like 897 1076 - -
Mtr3g1328 1100 CDD AAA 159 290 - -
Mtr3g1328 1100 Gene3D - 144 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1328 Mtr-Chr3 24322328 24328477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1328 172 680 WRKY Transcription Factor Family AT5G45050 23.949 6.76e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1328 - - mtr:MTR_3g053200 1687.93