Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1314 ATGAATAAGATTTTGGTTTGGTTTCATCGATTTGTCGTGTTCTTGTTGCTTACAAGGGTTTCTTCACTTCCACACATTGATGATGGCCATGTAGATTCAGATGCTGCAAGAATTCTGGATCAGGAGCAGAGTGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCGTTCAAGAGTATTTGACGCCATTTGTAGAGAAAGAAAAATATAATATCTCAAGAAGGTGCAGGCTTCACCCTGACAATGATATATATAGAGATCAGGAACAACATAAATCTCATATAGATATAAATGAATGGCAGTGTGGATACTGTAAGAAAACTTTCTACGAAGAGAAACATCTTGATCAACATTTCGACAACAGACACTCCAATTTACTTAATTTGAAAGAAAGCCGGTGCTTAGCAGATGTATGTGGGGCACTGCACTGTGATCATGAAATTAATTCTGGGTCAAAAAAATCAAAGTGCAATCCTGCTGCTGCAGCAAGAAATAAGCATATATGTGAGACCATAGCTGATAGTTGTTTTCCAGTAAACGAGGGTCCTGCAGCGAGCCGGCTTCATGAATTCTTCTTGCATCAATTCTGTGATGCTCACAGCTGCACTGGACGTGGAAAGCCTTTCTCCAGAGGACGCAGGAAAAAGACAAATGTGTTCTACATAGTTGCCTCCATTTTTCTTGTGATGTTGCTGGTACTCTTTTATCTCTACATGTATTTATATCAGAGAGGATTGAAAAAGGAAAGTCAAATGCTGAGGCGTGTCTCACAAGCAGGCCGAAAAAAGAAGCCATCATAA 819 0.3944 MNKILVWFHRFVVFLLLTRVSSLPHIDDGHVDSDAARILDQEQSGDHQIHCSRERSRIAWKIVQEYLTPFVEKEKYNISRRCRLHPDNDIYRDQEQHKSHIDINEWQCGYCKKTFYEEKHLDQHFDNRHSNLLNLKESRCLADVCGALHCDHEINSGSKKSKCNPAAAARNKHICETIADSCFPVNEGPAASRLHEFFLHQFCDAHSCTGRGKPFSRGRRKKTNVFYIVASIFLVMLLVLFYLYMYLYQRGLKKESQMLRRVSQAGRKKKPS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1314 272 SUPERFAMILY Expressed protein At2g23090/F21P24.15 95 131 - -
Mtr3g1314 272 ProSitePatterns Zinc finger C2H2 type domain signature. 108 129 IPR013087 -
Mtr3g1314 272 PANTHER ZINC FINGER PROTEIN-RELATED 5 272 - -
Mtr3g1314 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 131 IPR013087 -
Mtr3g1314 272 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1314 Mtr-Chr3 24109262 24113852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1314 26 272 C2H2 Transcription Factor Family AT5G63280 58.635 4.69e-108 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr3g1314 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1314 - - lang:109338698 448.358