Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1304 ATGGTTCAAGTCGCTAAGAGGAAGAAAGGAAGGCCATCAAAGGCGGATCTAGCTCGCCGCGTCGCCGAATCTCAGGCCGCCGCCGCAACGGAATCTGATTCACGGCGGAGTCTCCGCCGCAAGAACGTGAGGTATAATATAATCGAATACGACGGTGATTATGTTGATGATGACGAAGAAGATGAGAGGAAGCGCGAGAAGAAGAAATTGAAATTGATGGCGAAGCTGCAGCAGGAGGAACGAGAAGAAGAATTGGAAGAGAATGAAGATCACGCGCCAATGGAAGAAGATGAAGAAGAGATTGGTGAAATTGAAGGTGGAGAAGAAAATGAAGATGTAGAAGAAAAAGTTGAAGAAGATAGTGCGATAAAGGGTACAAAAGTTGATTCAAAAGGGCTCCACTTTGTTTCTGTTTCAGCCAATTATCCGAATGGGATTCCGTTGCCTGATAGGAAGATTTTGGAAGTGATCCTTGACAAGCTTCAGAAGAAGGACACGTATGGTGTTTTTGCGGAGCCGGTTGATCCTGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCCATGGATTTTGCTACGGTGAGGAAGAAGTTGGCGAATGGAGCTTACCCTACGTTAGAGCAACTTGAGAGTGATATATTTTTAATTTGCTCAAATGCAATGAAATACAATGCACCGGAGACTGTATACCACAGACAGGCACGAACAATACAAGAACTTGGGCGGAAGAAGTTTGAGAAGTTAAGGATTAAATTCGAACGTACACAGGTTGAGTTAAAATCAGAACAGAAAACACGGTCTAATTCTTTGGTTAAAAAGTCATTGAAAAAGCCACCGAGTTGTGCCTCACAAGAATCTTTTGGCTTTGATTTATCCTATGGAGATGTACAGGCAAGTTCCTATCCAATGCAAGGTGGTAGCTGTGAGAGGCCTGGCAACATTGATGGTACTGTGGAAGGGAATGCTTTCATGATTGATGCAAATCAAGATAAAGCTGAAGATGTTATGTCAGGGAAGAATATGGTCTCTAAGATGGGAAGGAAGTCATTTGTGCTTGACGATAATCGTCGTGCATCATATAATATGTCTAATCAACCAATCATTAGAACAGATTCAACATTTATGACCTTTGAGAGCGGAATGAGGCAGCTGGTTACTGTTGGCATCCATGCTGAATATTCCTATACTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCTGTTGTTTGGAACATTGCTTCCAACAGGATTCAACAGGCACTTCCTGCTGACTGTAAATTTGGTCGTGGATGGGTTGGAGAGTATGAACCGATTCCAACCCCGATATTTATGCTTGGTAATAATCTCCAGAAAGAAACTAGTTTGATTATGAAGTTGAACGGTGACAAAAATGGTAAGGGTGTGGAACCCAAAACTGAACATCCTGTAAATGGACGGAAGCTTGAGGGAAAACATTCTTCAGATTGTCCTACCAATGGTACTGTATACGAAGGAAATCCTTCTATTGGTTTTAATGGAGTGAAGTTCAATGCTTCTCTCAACATCCCCAATCAGCAGAATTCCCAATCTAGGAATTTTGGCAATTCTGAGAACAAGAGCTTGAATAAAGTGGAGCTGAAATCCTTACCCTCCAGTAATCAAAATAATTCCAGTGTGGTTGCAAAGTTTGGAAGTAATACTCCTACAGCAGAGTCTAATCCCAAAGAGAGTGCACCTAGGAACTTGAATTCTTTGCCATCTACAACTTTCAAGCAGCCAGATACTAATGAAGTTGTTAGCGGAGAATTGCCTGACGGAAAAGTCATGAATACAAGCTTGAATAGACGGTTGACTGGTCCATCATCTGATAGTACAACAAACCAAACAATCAGAACAGCTCCTTTTGTTTCCCGTGGGCAGGAGCAGGGTCTCAGTGAACCACTTCAGTCCATGAGAATGTTCACAGAAGAGGCTCAAAAGCCACAGACTTCTAATTATTCACCAGTTGATACTCTGCCAGACAAACCATCAGCTCAATCTGGACAAAGAGATACCCCGGGCAATGCTTCTGTGGCAGCTGCCCAGGTATGGATGTCTGCAGGGGCAGGAGGGTTTAATCTAGGACCTGAGAATACTGGTTCATCCAAAAATCAGATTTCTGCAGATTCTTTTCACAATACAACGAGAGAGTTCCATCAGCATATTTCACGAATTCAGGGTGAGTTTCCGTCTAGTGGAATGTCTTTACAGTCTAATAAGAACAATCTTCCATTTCATTCACCTAGACCTCAACCTATTCACACAGGTGCCGTTTCACAGTTCCCCAACCAACCTATGGTATCCCCTCAATCAACAACCGCGGGCCGACCTACATTTCAAATGCAGTCCCCTTGGAGAGGTCTCAGTCCTCGAAGCCAATCAAGGCAAAAACAGGGAACCCTTCCGCCTGACTTGAATATTGATTGTCAATCTCCAGGGTCACCTGCAAAATCTTCTAGCTCACAGCAACCAGACCTAGCTTTGCAACTATGA 2517 0.4331 MVQVAKRKKGRPSKADLARRVAESQAAAATESDSRRSLRRKNVRYNIIEYDGDYVDDDEEDERKREKKKLKLMAKLQQEEREEELEENEDHAPMEEDEEEIGEIEGGEENEDVEEKVEEDSAIKGTKVDSKGLHFVSVSANYPNGIPLPDRKILEVILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFATVRKKLANGAYPTLEQLESDIFLICSNAMKYNAPETVYHRQARTIQELGRKKFEKLRIKFERTQVELKSEQKTRSNSLVKKSLKKPPSCASQESFGFDLSYGDVQASSYPMQGGSCERPGNIDGTVEGNAFMIDANQDKAEDVMSGKNMVSKMGRKSFVLDDNRRASYNMSNQPIIRTDSTFMTFESGMRQLVTVGIHAEYSYTRSLARFSASLGPVVWNIASNRIQQALPADCKFGRGWVGEYEPIPTPIFMLGNNLQKETSLIMKLNGDKNGKGVEPKTEHPVNGRKLEGKHSSDCPTNGTVYEGNPSIGFNGVKFNASLNIPNQQNSQSRNFGNSENKSLNKVELKSLPSSNQNNSSVVAKFGSNTPTAESNPKESAPRNLNSLPSTTFKQPDTNEVVSGELPDGKVMNTSLNRRLTGPSSDSTTNQTIRTAPFVSRGQEQGLSEPLQSMRMFTEEAQKPQTSNYSPVDTLPDKPSAQSGQRDTPGNASVAAAQVWMSAGAGGFNLGPENTGSSKNQISADSFHNTTREFHQHISRIQGEFPSSGMSLQSNKNNLPFHSPRPQPIHTGAVSQFPNQPMVSPQSTTAGRPTFQMQSPWRGLSPRSQSRQKQGTLPPDLNIDCQSPGSPAKSSSSQQPDLALQL* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1304 838 ProSitePatterns Bromodomain signature. 168 224 IPR018359 -
Mtr3g1304 838 Gene3D - 149 270 IPR036427 GO:0005515
Mtr3g1304 838 MobiDBLite consensus disorder prediction 1 42 - -
Mtr3g1304 838 Coils Coil 67 89 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 652 685 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 76 115 - -
Mtr3g1304 838 CDD Bromodomain 150 246 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 760 838 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 543 639 - -
Mtr3g1304 838 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 838 - -
Mtr3g1304 838 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 838 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 463 495 - -
Mtr3g1304 838 ProSiteProfiles Bromodomain profile. 162 232 IPR001487 GO:0005515
Mtr3g1304 838 MobiDBLite consensus disorder prediction 466 488 - -
Mtr3g1304 838 SMART bromo_6 143 251 IPR001487 GO:0005515
Mtr3g1304 838 Pfam Bromodomain 155 236 IPR001487 GO:0005515
Mtr3g1304 838 MobiDBLite consensus disorder prediction 82 115 - -
Mtr3g1304 838 PRINTS Bromodomain signature 165 178 IPR001487 GO:0005515
Mtr3g1304 838 PRINTS Bromodomain signature 179 195 IPR001487 GO:0005515
Mtr3g1304 838 PRINTS Bromodomain signature 195 213 IPR001487 GO:0005515
Mtr3g1304 838 PRINTS Bromodomain signature 213 232 IPR001487 GO:0005515
Mtr3g1304 838 SUPERFAMILY Bromodomain 138 249 IPR036427 GO:0005515
Mtr3g1304 838 MobiDBLite consensus disorder prediction 543 591 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 606 639 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 262 284 - -
Mtr3g1304 838 MobiDBLite consensus disorder prediction 652 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1304 Mtr-Chr3 24000392 24006202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1304 K22184 - gmx:100792844 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1304 3 24000392 24006202 Mtr5g3022 5 39028348 39032371 PCT