Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1298 ATGTTTTCCACCACTATCACAAATGGAAGAATCCCCTCAAAACCCCACTTTCCACAACACTTCCAAATCCGTTGCGGAATACGCGAAATCCGCGACCGAATCAACAGCGTCAAAACAACTCAAAAAATCACCGAAGCTATGAAACTCGTCGCCGCCGCCAGAGTCCGTCGCGCACAAGAAGCCGTTATCAACTCCCGCCCCTTCTCCGAAGCCTTCGCCGAAACTCTCCATTCGATCAACCAATCCCTCCAAAACGACGACGTTGTCGTCCCTTTAACCGCCGTCCGCCCCGTTAAAACCGTCGCACTCATCGTCATCACCGGTGACCGTGGCTTATGTGGCGGATTCAACAACTCCGTCGCTAAAAAAGCCGAAGCCCGTGTCATGGAATTGAAGAATCTTGGTATCAATTGTGTTGTTATTAGTGTTGGAAAAAAGGGTAGTTCTTATTTTAACCGTAGTGGTTTTGTTGAGGTTGATAGGTTTATAGACAATGTCGGTTTTCCTACGACAAAAGATGCACAAATTATTGCTGATGATGTTTTTTCGCTGTTTGTCACTGAGGAAGTTGATAAAGTTGAACTTGTTTATACAAAGTTTGTTTCTTTAGTTAGGTTTAATCCAGTGATTCAAACGTTGTTGCCTTTATCGAAAAAAGGCGAAGTTTTTGATGTGAATGGGAATAGTGTTGATGTTTTGGAAGATGAGTTTTTTAGGTTAACTTCAAAAGATGGAAAATTGGCTTTGAAGAGAGATGTGAAAAAGAAGAAAATGAAAGATGGGTTTGTTCCGGTTATGGAATTCGAGCAAGATCCTGCTCAGATTCTTGATGCAATGATGCCACTTTATTTGAATAGTCAAGTTTTGAAGGCATTGCAAGAATCATTGGCTAGTGAACTTGCTGCAAGAATGGGTGCTATGTCGAATGCTACGGATAATGCTGTTGAGTTGACGAAGGAGCTTTCAGTTGCTTATAATAGGGAAAGACAAGCTAAAATTACTGGTGAGATTTTGGAGATTGTTGCCGGAGCTGAAGCATTAAGACCAATTGATTGA 1056 0.4214 MFSTTITNGRIPSKPHFPQHFQIRCGIREIRDRINSVKTTQKITEAMKLVAAARVRRAQEAVINSRPFSEAFAETLHSINQSLQNDDVVVPLTAVRPVKTVALIVITGDRGLCGGFNNSVAKKAEARVMELKNLGINCVVISVGKKGSSYFNRSGFVEVDRFIDNVGFPTTKDAQIIADDVFSLFVTEEVDKVELVYTKFVSLVRFNPVIQTLLPLSKKGEVFDVNGNSVDVLEDEFFRLTSKDGKLALKRDVKKKKMKDGFVPVMEFEQDPAQILDAMMPLYLNSQVLKALQESLASELAARMGAMSNATDNAVELTKELSVAYNRERQAKITGEILEIVAGAEALRPID* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1298 351 Hamap ATP synthase gamma chain [atpG]. 24 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 ProSitePatterns ATP synthase gamma subunit signature. 333 346 IPR023632 -
Mtr3g1298 351 Pfam ATP synthase 27 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 Gene3D ATP synthase, gamma subunit, helix hairpin domain 25 88 - -
Mtr3g1298 351 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 26 347 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 Gene3D ATP synthase, gamma subunit, helix hairpin domain 249 347 - -
Mtr3g1298 351 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 27 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 18 351 - -
Mtr3g1298 351 CDD F1-ATPase_gamma 27 344 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 Gene3D - 90 218 - -
Mtr3g1298 351 PANTHER ATP SYNTHASE GAMMA CHAIN 18 351 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 PRINTS ATP synthase gamma subunit signature 98 117 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 PRINTS ATP synthase gamma subunit signature 191 208 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 PRINTS ATP synthase gamma subunit signature 294 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr3g1298 351 PRINTS ATP synthase gamma subunit signature 325 346 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1298 Mtr-Chr3 23913487 23914884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1298 5 348 Primary Pumps ATPases AT1G15700 70.435 1.08e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1298 K02115 - qsu:112000322 461.84