Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1287 ATGGCTTTACTATCCTCTTCATCTCTAATGTTCACTGTGCGAAGGTGCCAACCACAGCTGGTACCTCCAGCTGCACCCACTCCTCGTGAATTTAAAATACTATCTGACATAGATGATCAAAAAAGTCTCCGTTGCAATATTCTTCTCATCTTTATCTATCATCATGAACCATTAATGACAAAGAAAGACCCTGTTAAGGTTCTTAGACATGCACTCTCACAAGTACTTGTGCATTACTATCCATTTGCGGGAAGGATTAGGGAAGGAGTTGGACAAAAGTTAATGGTGGATTGTACTGGTGAGGGTGTCATGTTCATTGAAGCTGAAGCTAATGTAACACTTGATGACTTTGGTGACGGTTTGCATCCCCCATTCCCATGCGTCGATGAACTTCTATACGATGTTCCAGATTCGGTACTAAATATTGATCGTCCCATTCGACTTATACAGGTCAAGTTATATTATTTCTCACATCCTTTAAATTTTACAGGCCTCACTTTTAACTTAATCACCGTTTTTCTCAATGGAGGATTGATATCATCATAG 546 0.3974 MALLSSSSLMFTVRRCQPQLVPPAAPTPREFKILSDIDDQKSLRCNILLIFIYHHEPLMTKKDPVKVLRHALSQVLVHYYPFAGRIREGVGQKLMVDCTGEGVMFIEAEANVTLDDFGDGLHPPFPCVDELLYDVPDSVLNIDRPIRLIQVKLYYFSHPLNFTGLTFNLITVFLNGGLISS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1287 181 Pfam Transferase family 16 151 - -
Mtr3g1287 181 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 152 - -
Mtr3g1287 181 PANTHER ALCOHOL ACYLTRANSFERASE 11 152 - -
Mtr3g1287 181 Gene3D - 12 180 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1287 Mtr-Chr3 23731931 23732476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1287 52 119 Monolignol Biosynthesis Gene Families AT5G48930 38.571 6.95e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1287 - K19861 mtr:MTR_3g051790 369.777