Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1275 ATGGAGAACCATAATAAGGTGCTAATGCTAATGGTGTTTACTTTCTTCTTTTGCTTCATGGCCATGCCCACTTACTCTAAACATAAAACTCTTACTACCATTGCTTCAAATCAGTTTATGCAATACAGTGATACACTTGTTTCTGGAGATGGATTGTTTGAAGCAGGATTTTTCAACTTTAGAGATCCACTACGCCAATACTTCGGTATATGGTACAAGAACATATCACCAAGGACTATTGTGTGGGTTGCCAATAGAAATACGCCTGTACAAAACTCAACAGCGATGCTGAAACTCAATGGTCAGGGAACTCTTGTTATTGTTGATGGCTCCAAAGGCGTTATCTGGTCCTCCAATTCATCAAGAATTGTGGGAAAATCAGTATTGCAGTTGTTGGATTCAGGAAACCTTGTTGTAAAAGATGCAAATAGCAGCAGTGAGGATGAGGAGTTTTTGTGGGAAAGCTTTGATTATCCTGGTGACACGTTGCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTGACTGGTCCATATAGATATCTCACTTCTTGGAGAACCTCTGAAGATCCTGCTGTAGGTGAGTTTTCGTATAGGATCGATACTCATGGTTTTCCTCAACAAGTTATTGCAAAGGGAACAACAATTATGTATAGAGGAGGGTCATGGAATGGATATGAGTTTTGGCAAAGAATTAATAGGGTCTTGAATTACTCATTTGTGATTACTGACAAAGAAGTCACATATCAATATCAAACGTGGACCAATTTCATTATTACTAGATTTGTGCTAGATACATATGGAACTCCACAACGTTTTATATGGTCGGATTGGACACAAAATTGGGAGGCTACAGCTACTCGTCCTATAGACCAGTGTGAAGAGTATGCCTGTTGTGGGATCAACTCTAACTGCAATATTAATGAATCTCCAATTTGTGAATGCTTGGAAGGTTTCACGCCAAAATTTCAATCAAAATGGAAGTCATCGGATTGGTCTGGCGGGTGTCTGAGGAGAACAAAATTGAATTGTCTCAATGGAGATGGATTTTTGAAGTACACAAACATGAAGTTGCCAGACACGTCGGCATCATGGTATGACAAGAGCTTGAGCCTTCAGGAATGTAAGACGACGTGTTTGAAAAATTGTAATTGCACTGCATATGCAAATTTAGATATCAGAGATGGTGGGAGTGGTTGCTTACTTTGGTTTGACAATATTTTGGACATGAGAAAACATCGAGACCAAGGACAAGACATTTATATACGGCTAGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTTGAAGCTTTCTGGGATTTTTGCCGGGGTTATTGCATTTATTATAGGACTAGCCGTTCTCGTATTGGTCACGTCAGCATATAGAAAGAAGCTTGGCCATATAAAAAAGTTATTTCACTGGAAGCAGAAGAAGGAGAATGAAGATGATGACTTGGCCACAATATTTGATTTTTCAACCATCACTAATGCAACAAATAACTTCTCTATCAGAAACAAATTGGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATAATGATAGATGGCCAAGAGATCGCCGTTAAGAGGCTTTCTAAAACATCGGGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGATGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTTCTTTATTTTTGATGCTATGCGAAGCAAGTTACTTGATTGGACTAAACGTTTGGAAATTATTAATGGTATTGCTCGGGGGCTTCTGTATCTCCATCAAGATTCTACACTACGAATCATACATAGAGATCTCAAGACAAGCAACATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCCGAGGCTAATACAAATAGAGTGATGGGAACCTATGGATACATGCCTCCAGAATATGCTGTGCATGGATCATTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTGCTTGAAATAATTAGCGGCAGGAAGAATCGCGGATTTTGTGACCCTCTACATCATCTAAACCTCCTTGGTTATGCATGGAGACTATGGATTGAAGAAAGGGCAAAGGAGTTAATAGCTGACATATCATATGATGAGGCCATATGTTCAGATATAATAAGATTTATTCATGTGGGTTTATTGTGTGTACAACAGAAAGCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAGAAGTTACTCCCAACACCAAGTGAACCTGGGTTCTATGCAGGAAGAGATAACAATACAATCAGAACAGCATCTTCTTCAAAAGTGTGTTCAATAAATGAAGCTTCAGTCTCATTGTTAGAGGCCCGATAG 2460 0.3862 MENHNKVLMLMVFTFFFCFMAMPTYSKHKTLTTIASNQFMQYSDTLVSGDGLFEAGFFNFRDPLRQYFGIWYKNISPRTIVWVANRNTPVQNSTAMLKLNGQGTLVIVDGSKGVIWSSNSSRIVGKSVLQLLDSGNLVVKDANSSSEDEEFLWESFDYPGDTLLAGMKLKSNLVTGPYRYLTSWRTSEDPAVGEFSYRIDTHGFPQQVIAKGTTIMYRGGSWNGYEFWQRINRVLNYSFVITDKEVTYQYQTWTNFIITRFVLDTYGTPQRFIWSDWTQNWEATATRPIDQCEEYACCGINSNCNINESPICECLEGFTPKFQSKWKSSDWSGGCLRRTKLNCLNGDGFLKYTNMKLPDTSASWYDKSLSLQECKTTCLKNCNCTAYANLDIRDGGSGCLLWFDNILDMRKHRDQGQDIYIRLASSELDHKKNKRNLKLSGIFAGVIAFIIGLAVLVLVTSAYRKKLGHIKKLFHWKQKKENEDDDLATIFDFSTITNATNNFSIRNKLGEGGFGPVYKGIMIDGQEIAVKRLSKTSGQGIEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDFFIFDAMRSKLLDWTKRLEIINGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFCDPLHHLNLLGYAWRLWIEERAKELIADISYDEAICSDIIRFIHVGLLCVQQKAENRPNMSSVVFMLKGEKLLPTPSEPGFYAGRDNNTIRTASSSKVCSINEASVSLLEAR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1275 819 Gene3D Hepatocyte Growth Factor 340 425 - -
Mtr3g1275 819 Pfam Protein tyrosine and serine/threonine kinase 505 771 IPR001245 GO:0004672|GO:0006468
Mtr3g1275 819 Gene3D - 26 156 IPR036426 -
Mtr3g1275 819 ProSiteProfiles Bulb-type lectin domain profile. 31 152 IPR001480 -
Mtr3g1275 819 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 22 819 - -
Mtr3g1275 819 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1275 819 PIRSF SRK 3 819 IPR024171 GO:0004674
Mtr3g1275 819 SUPERFAMILY Protein kinase-like (PK-like) 488 774 IPR011009 -
Mtr3g1275 819 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Mtr3g1275 819 Pfam PAN-like domain 343 409 IPR003609 -
Mtr3g1275 819 Pfam D-mannose binding lectin 79 185 IPR001480 -
Mtr3g1275 819 SMART serkin_6 503 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1275 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 819 - -
Mtr3g1275 819 Pfam S-locus glycoprotein domain 217 322 IPR000858 GO:0048544
Mtr3g1275 819 CDD B_lectin 45 159 IPR001480 -
Mtr3g1275 819 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Mtr3g1275 819 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Mtr3g1275 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 190 IPR036426 -
Mtr3g1275 819 CDD STKc_IRAK 509 776 - -
Mtr3g1275 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mtr3g1275 819 SMART ntp_6 344 423 IPR003609 -
Mtr3g1275 819 SMART blect_4 37 159 IPR001480 -
Mtr3g1275 819 CDD PAN_AP_plant 339 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1275 Mtr-Chr3 23561156 23565185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1275 475 819 Receptor kinase-like Gene Family AT3G45860 52.235 8.39e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g1275 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1275 - - gmx:100819820 1145.18