Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1256 ATGAGTTGTTTTCCATGTTGTACGTCTGAAGAGAGGATCAAGAAGAGGTCATTGAAGAAAAGCATTAAGCAATACCATGATGCAAAAGTTTTAACTTCATTTACAAATATCTCTTTTAAAACTGATAGTGGCAAGAGAAGGTTCATAGCAGAGGAGTTAGCAAAGCTTGGTAAAGGAAATGTTACTTCTAAGATTTTCACTTATCGGGAGCTATGTGTCGCAACTGAAAATTTTCAACCTACCAATATGATCGGAGAAGGAGGTTTTGGAAGGGTATACAAAGGAACGATTAAAAACACAAATCAAATTGTTGCTGTGAAGGCACTTGACAGAAATGGATTTCAAGGGAACAGAGAATTCCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCATCCTAACCTTGTTAACTTGGTAGGGTATTGTGCTGAAGGTGATCAGAGGGTTTTGGTTTATGAATACATGGCCAATGGTTGCTTAGAAGAGCACTTGCTTGATTTAGCTCCTGGTAGAAAGCCTTTGGACTGGAAAACAAGAATGAAAATTGCAGAAGGAGCAGCAAAAGGGCTTGAATATTTACACGAAGAAGCAAACCCTCCGGTGATATATCGCGATTTCAAAGCATCAAACATACTATTAGATGAAAACTACAATCCAAAGCTTTCTGATTTTGGACTTGCAAAGCTTGGCCCGACTGGTGAGAAAGAACATGTATCCACCAGAGTGATGGGAACTTATGGCTATTGTGCTCCTGAGTATGCATCAACAGGGCAGCTTAGTACAAAATCAGATGTGTATAGTTTTGGAGTTGTGTTTTTGGAGATTATCACAGGCAGAAGAGTCATTGACAATTCTAGGCCATCAGAAGAGCAAAATTTAGTCCTTTGGGCACAGCCTCTTCTAAGAGACAGAAAGAAATTCACACAAATGGCAGATCCATTGCTAGAAGATAAGTACCCTATAAAGGGTCTATATCAAGCTCTAGCAATTGCAGCTATGTGTCTGCAAGAGGAAGCTGATACTAGGCCTTTAATCAGTGATGTAGTTACAGCTCTTGAGTTTTTAGCAAACAAGAAAGAAGAGGATGGAGGACAATATACAAAAGAGACTTTTGCTTCTCAGGGTGGAAATGATAATGGAAACGATGAAGCTAATGTTGTACACGATGATGATGATGATGATGATGACGACGACAATGAAGAGGATGAGGATAGTGATGACGATGATGAGGATGCTGATAGTGATAATGATAATGATGACAAAGGTCATAGTGATAATGATAATGATGATAAAGGTCATAGAAGATAG 1308 0.3876 MSCFPCCTSEERIKKRSLKKSIKQYHDAKVLTSFTNISFKTDSGKRRFIAEELAKLGKGNVTSKIFTYRELCVATENFQPTNMIGEGGFGRVYKGTIKNTNQIVAVKALDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGDQRVLVYEYMANGCLEEHLLDLAPGRKPLDWKTRMKIAEGAAKGLEYLHEEANPPVIYRDFKASNILLDENYNPKLSDFGLAKLGPTGEKEHVSTRVMGTYGYCAPEYASTGQLSTKSDVYSFGVVFLEIITGRRVIDNSRPSEEQNLVLWAQPLLRDRKKFTQMADPLLEDKYPIKGLYQALAIAAMCLQEEADTRPLISDVVTALEFLANKKEEDGGQYTKETFASQGGNDNGNDEANVVHDDDDDDDDDDNEEDEDSDDDDEDADSDNDNDDKGHSDNDNDDKGHRR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1256 435 MobiDBLite consensus disorder prediction 385 416 - -
Mtr3g1256 435 SUPERFAMILY Protein kinase-like (PK-like) 64 358 IPR011009 -
Mtr3g1256 435 Gene3D Phosphorylase Kinase; domain 1 63 154 - -
Mtr3g1256 435 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 375 - -
Mtr3g1256 435 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1256 435 MobiDBLite consensus disorder prediction 365 435 - -
Mtr3g1256 435 PANTHER OS07G0668900 PROTEIN 1 375 - -
Mtr3g1256 435 MobiDBLite consensus disorder prediction 367 381 - -
Mtr3g1256 435 CDD STKc_IRAK 84 353 - -
Mtr3g1256 435 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Mtr3g1256 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Mtr3g1256 435 MobiDBLite consensus disorder prediction 417 435 - -
Mtr3g1256 435 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Mtr3g1256 435 Pfam Protein kinase domain 81 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1256 Mtr-Chr3 23212477 23215401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1256 60 356 Glycoside Hydrolase AT3G07070 69.697 2.84e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr3g1256 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1256 - - cam:101510927 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1256 3 23212477 23215401 Mtr5g3258 5 41412725 41415670 PCT