Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1230 ATGATTTCATCGTTGAGACAACCTGGTATTGTGATCACTGGTTCTGATGCCGGTTTAAGGAAAAGACATGCAACCCTAGTTCAACCACAATCTTTTCTCCCATCTTTGGTTGGTGGAAAATCACAAAGATCTGTGATTTCAATGAAGAAGCCTCTTCATATTGCATGTGCTGGTGTTGGAAATTTTGGGTCAGTGAAGAATTTTGAATTTGAATCAGAGAAGAAGAGTTTTGAAAAGGGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGGTTGAAGGAGCAGAAACACCTTCAGAGGCTGCAAAGAAAGTGAAAATTGGGATATATTTTGCAACTTGGTGGGCTTTGAATGTTGTGTTTAATATTTACAACAAGAAGGTTTTGAATGCTTACCCTTACCCTTGGCTTACATCAACTCTCTCACTTGCTTGTGGCTCTCTTATGATGTTGATCTCTTGGGCCACTAGGATTGCTGAAGCTCCTAAGACTGATCTTGAATTTTGGAAGACTTTGTTCCCTGTTGCTGTTGCACACACAATTGGACATGTCGCGGCTACGGTTAGTATGTCCAAAGTGGCTGTGTCGTTTACACATATCATCAAGAGTGGCGAGCCTGCTTTTAGTGTTCTGGTTTCGAGATTTATCTTGGGTGAAACCTTCCCCGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAACTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAATCTGGCATTTGTGTTCCGCAACATCTTCTCGAAAAAGGGGATGAAGGGAAAGTCTGTTAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCTGTGGAAGGACCAGCAATGTGGGCTGCTGGATATAAAACAGCTCTCGCTGAAATTGGACCCCAATTCTTATGGTGGGTAGCAGCTCAGAGTATATTCTATCATCTATACAATCAGGTGTCTTACATGTCGTTGGATGAGATCTCTCCCCTAACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTATCTTCAATTATCATCTTCCATACACCAATTCAGCCTGTCAATGCTCTTGGAGCCGCAATTGCTGTCTTCGGGACCTTCTTATACTCTCAGGCAAAACAATAG 1206 0.4138 MISSLRQPGIVITGSDAGLRKRHATLVQPQSFLPSLVGGKSQRSVISMKKPLHIACAGVGNFGSVKNFEFESEKKSFEKGDLVKCEAYEADRSEVEGAETPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPAMWAAGYKTALAEIGPQFLWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPIQPVNALGAAIAVFGTFLYSQAKQ* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1230 401 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 52 400 - -
Mtr3g1230 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 398 - -
Mtr3g1230 401 Pfam Triose-phosphate Transporter family 109 397 IPR004853 -
Mtr3g1230 401 PANTHER SOLUTE CARRIER FAMILY 35 52 400 - -
Mtr3g1230 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 244 - -
Mtr3g1230 401 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 109 400 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1230 Mtr-Chr3 22640029 22644525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1230 1 400 Antiporters AT5G54800 72.816 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1230 K15283 - gmx:732659 668.307