Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1225 ATGAAACGTTATGGTAAGAACTACTTATTAGAAGCCACTACTATGCAGTTTAGAATGATTGGACACCATATCGAAGATATAGAAAGAAGAAAAACTACAGCTGAATTGTTGAAACTAACAGCAGAAGAAGTTGAAATGAAGAAAAAGGCTAATGAATGTGATATTCCAAAAGGGTCAAGACCTTACAGTAGATTTGAAGCAATTAGTGCACATATATGGAAAAGTGCTTCTAAAGCACGTAAGCTTGAAGAGAATCAACAAAGTGTTGTTAGGTTCAATGTTGAAATCCGGAATAGAATAATTCCAAATCTTCCTAAGAATTATTATGGAAATGCTTTGATTCAAACAGCAGTAGAAGGGTATATTGGAGAAATCTTATCGAAGCCGTTGAGTTATGTTGCAATGAAGATAAGGGAAGCACATGAGTTGATAACAAATGAATACATAAGGTCACAAATTGATGTTATTAGAGGTTTTGAAAATTTAGATGATGCAAGGAAATTGTTTATAGGTGGAGAAGGTAAGAATGCTACATATTTTGGGAATCCTAATCTTCATATAACAAGTTGGATGGCTTTGCCTTCACATAAAGCTGATTTTGGGTGGGGAAAGCCATTTTACTTTGGTTTAGGATATGTGTCTCCACATGATAGGGGATTAATTTATTTAAGTCCTGAAGGAGATGGTTCTGTTATTGTGTGTATGCATTTTCAAGTTGAAACTATGCAGCTTTTCAAGAAGTTGTTCTATGGGGATTTATATGAATTGTTCACTTCAGCAAGATTGTGA 789 0.3422 MKRYGKNYLLEATTMQFRMIGHHIEDIERRKTTAELLKLTAEEVEMKKKANECDIPKGSRPYSRFEAISAHIWKSASKARKLEENQQSVVRFNVEIRNRIIPNLPKNYYGNALIQTAVEGYIGEILSKPLSYVAMKIREAHELITNEYIRSQIDVIRGFENLDDARKLFIGGEGKNATYFGNPNLHITSWMALPSHKADFGWGKPFYFGLGYVSPHDRGLIYLSPEGDGSVIVCMHFQVETMQLFKKLFYGDLYELFTSARL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1225 262 Gene3D - 23 251 IPR023213 -
Mtr3g1225 262 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 253 - -
Mtr3g1225 262 Pfam Transferase family 38 249 - -
Mtr3g1225 262 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 25 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1225 Mtr-Chr3 22563887 22564792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1225 32 250 Monolignol Biosynthesis Gene Families AT5G48930 34.091 1.42e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1225 K13065 - gmx:100778626 292.737