Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1224 ATGGTAACCATTCAAGCTTCTTACAATGTGACTCCAAATGAAGTAACCCCAAATGGTCATTTATGGCTCTCAGATATAGATCAAACTGTGCGTTTCAACCTCCACACACCACTGATCTATATCTACAAACAAAACCAGAACCAAAATAACAAAATCATAGAAACCTTAAAGAACTCACTCAGCAAAATCCTAGTTCACTACTATCCTGTAGCTGGTCGATATTCTTACACAAAAGGCGAAGCTGAAAGCTCAAAAAGTATTCATGATTATGGTGACTTTGCACCTTCTGACTCCACCAAAGAGCTTATTCCAAAAGTTGATTACAACAAACCAATTGAAGAAATGCCATTGTTTGTTGTTCAACTCACAAGATTTCGAAACAATGATGAAAGCTTTGCAATTGGAATTGCTTATTCTCATCTTTTATCAGATGGTGTTGGTTGTATTGACTTTATCAACTCATGGGCCAAAATTGTCCAAAAACAGGGTATAACAACAATACTCAAATTCTCACACACCCCAATTGAACCACGTTTTGAACACATGGAGTTGAAGCCACTACCATTCATTATAGGAAGATCTGACGACAATGCTGAAAGAAAGAAGAAAACAACAGCTGAATTGTTGAAACTCACAAAAGAAGAAGTTGAAAGGCTAAAGAAAAAGGCTAATGAATGTGATATTCCAAAAGGATCAAGATGTTATAGTAGATTTGAAGCTATTAGTGCACATATATGGAAAAGCGCTTCTAAGGCACGTAAGCTTGAAGAGAATCAACAAAGTGTTGTTAGGTTCAATGTTGAAATCAGAAATAGAATAATTCCAAATCTTCCTAGGAATTATTATGGAAATGCTTTGATTCAAACTTCAACAAGAGGGTTTATTGGAGAAATTACATCAAAGCCATTGAGTTATGTTGCACAAAAGATAAGGGAAGCAAATGAGTTGATAACAAATGAGTATATAAGGTCACAAATTGATGTTATTAGGGGTTTTGAGAATTTGGATGATGCAAGGAAATTATTTTTGGTTGGAGGTAGGGATGTTACATTTTCTGGGAATCCTAATCTTCATATAACAAGTTGGATGACTTTGCCTTCATATAAAGCTGATTTTGGGTGGGGAAAGCCTATGCATTTTGGTATAGGATATGTGTCTCCAAATGATAGAGGATTGATTCTTTTGAGTCCCGATGAGGATGGTTCTGCTATTGTTTGTATGCATTTTCAGGTTGAACTTATGCAGCTTTTCAAGAAGTTCTTCTATGAGGATATATATGAGTTGTTCACATCAGCAAGATTGTGA 1305 0.3556 MVTIQASYNVTPNEVTPNGHLWLSDIDQTVRFNLHTPLIYIYKQNQNQNNKIIETLKNSLSKILVHYYPVAGRYSYTKGEAESSKSIHDYGDFAPSDSTKELIPKVDYNKPIEEMPLFVVQLTRFRNNDESFAIGIAYSHLLSDGVGCIDFINSWAKIVQKQGITTILKFSHTPIEPRFEHMELKPLPFIIGRSDDNAERKKKTTAELLKLTKEEVERLKKKANECDIPKGSRCYSRFEAISAHIWKSASKARKLEENQQSVVRFNVEIRNRIIPNLPRNYYGNALIQTSTRGFIGEITSKPLSYVAQKIREANELITNEYIRSQIDVIRGFENLDDARKLFLVGGRDVTFSGNPNLHITSWMTLPSYKADFGWGKPMHFGIGYVSPNDRGLILLSPDEDGSAIVCMHFQVELMQLFKKFFYEDIYELFTSARL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1224 434 Gene3D - 1 186 IPR023213 -
Mtr3g1224 434 Coils Coil 202 222 - -
Mtr3g1224 434 Gene3D - 193 424 IPR023213 -
Mtr3g1224 434 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 425 - -
Mtr3g1224 434 Pfam Transferase family 1 423 - -
Mtr3g1224 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1224 Mtr-Chr3 22534977 22563283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1224 2 423 Monolignol Biosynthesis Gene Families AT5G48930 32.809 7.41e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1224 K13065 - gmx:100778626 464.536