Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1211 ATGGGTCATTTCAAGAAGGATTGTCCGGAGATTAATGGTAACTCCGCACAAATTGTCTCTGAGGGTTATGAGGATGCGGGTGCTCTGATGACACTTATGGGGAAATTATTTAGCAAGGCAATAGAAAAATCACGCTATGTATTTTGCTTCACGTGCATTATTAAGGAATTCAACAAAGAAAAGGTGAAGTTGGAAGCAGAAATGACAAATATTCGATTTGATGCTAAATCTTTACAAGAGCAGGTGCATAAGCTCATTGAAGAGAACACCGAGACAAAGAAGAGATGTTTTTTTGGATTTTGTCCTGATTGTATATGGAGATGTAAAAGGGGAGAGGAGCTGACAGGAAAAACAGAGGTGATTGAAAAACTGATAGAAACGGCAAAGAAACTAAAAAGTGTTGAATTTGGTCGTCGTCTTCCAGAAATTGAGTTTTATTCTGGAAATTACACTTCTTTTAAAAGCAGAGAGTTGAAATACAAAGAGCTTTTGGATGCAATAAAAGATGAGAATAACTATATAATTGTATTGCAAGGAATGGCGGGCATAGGTAAAACTACATTGGTAGAACAAGTATTTAAACAACTTCGCGGATCAAAGCATTTCGAGTATGCCATCTGTGTAACTGTGTCATTTTCTCCTGATATAAAAAAGATTCAATGTTATATTGCTGAATTCTTAGGACTGAAATTGGAGGATATCAGTGAATCAGATCGGTGTAAAAAGTTGTTGACCAGATTAACCAATGGTCAGAAAATTCTTGTGATATTAGATGATGTGTGGGATAATCTTGATTTTGATGTCATAGGGATTCCAAATAGTGACAATCACAAACGATGCAAAGTTCTTGTAACCACACGCAATCTGGAGGTATGCAAAAAAATGGCTTGTAAAAAGACAATTCAACTTGATATCTTAGATGAAGAAGAGGCATGGATCTTGTTCAAATGGTATGCCCGTCTAACTGATATTTCCTCCAAAAGAATTCTAGACAAGGGACATCAAATTGCATCTGAATGCAAAGGATTGCCAATTGCAATTGCTGTTCTCGGGAATAATTTGAGGGCCGAATTAAGTCGAGAAAAGTGGGATGTTGCTTTGAAGTCCTTACAAAAGGATGCGTCCATGGATGATGTTGATGATGTTTTGGTTGACATTTATAAATATTTGAAGTTAAGCTATGATTATCTAAAGGATGAAAAAGCTAAAGAATTGTTCCTCCTATGTTCTCTATTCGTAAAAGATGAAGAAATTTCAAATGAAATTCTAACTAGGTTTGGCATAGGAGTCGGCCTTTATGGGGAAGGCTATGACAAATACAAAGATGCTCGAAGTCAAGCAGTTGCAGCAACAAAAAAACTCCTAGATTCAATTTTATTGTTGGAGACAAAAAAAGGTGATCTGAAAATGCATGGCTTGGTTCATAATGCAGCCCAATGGATAGCAAACAAAGCTATTCAAAGAGTAAATCTTTCGAACAAAAACCAAAAGTCATTGGTTGAAAGGGATAATAATATCAAATATTTGTTATGCGAAGGGAATCTAAAGGATTTATTTTCATCTGAGTTTTATGGGTCTAAACTTGAGATTCTAATTCTCCACGTGAACATGTGGGGTACTGTGGACATCCCCATTTCATTCTTGGGAAGTATTTCAGGGCTTCGTGTTTTGAATTTATCAAATAAAAGTATTAATCTGGAGCGGCCAACTCTATCATTACCACAATCAATTAGTTCATTGATGAATATTCGTTCTCTATTAGTTGAAAGAGTCTATTTGGGTAACATCTCTATTTTGGGAAGCCTGCAAAGTCTAGAGACTCTTGAATTGGATCACTGTCAAATTGATGAACTTCCATGTGAAATTCAGAAACTGAAGAAACTGAGACTGTTGAACTTGGAAAAATGTGAAATTAGAAGTAACAATCCTATTGAAGTTATCCAAAGATGCACATCACTTGAAGAATTGTACTTCTGTCATAGTTTTAACAATTTTTGTCAGGAAATAACCTTACCTGCATTGGAAAGGTATCGTCTCTCTGATGGTTTCGGTATGATGAATGATTCACTGTCAAAATGTGTGTCTTTTCACCATGATCATTTCACAGAAGCAACATTTAAGCATGTGATGCAAAAAATAGAGCTTCTTCGGTTGGAAAGAGTTAAGAAGGGATGGAGAAATCTCATGCCAGAAATTGTTCCTATAGATCAAGGTATGAATGATCTAATTGAGCTTCATTTGAAATATGATTCACAACTACAGTACCTCATATACATTGAACATATTGATTCTCAAGTACCAACTGTCTTCTCCAAGTTGGTTGTACTACATCTTGAGGAAATGGAAAATTTGGAAGAATTATGCAATGGTCCCATCTCAATTGATTCAATGAACAATTTAGAGGAGCTAACCATGGAGTGCTGTCAACTTTTGCAAACATTGTCTAAATGCAGCCTAAATCTTCGCAATCTGAAGAACATGACCCTAAAATCATGTCCAACGTTGGTTTCTGTTTTTGACCTGTCAACATCTCGAAGCCTGCTGCTGTTGGAGAGCTTGGAAATAATTGATTGCAAAATATTGGAAAACATAATTACATGTGAAAGGAGAGTGGAATATGACACAAGGGAAGAAATACTGGATGGTGATATAGATAACAAGAGTTGCAGCTCAGTGATGTTTCCAATGCTGAAAATTGTCAATATTCAGAGTTGTCCCAAATTACAATTTATACTTCCATTTATCTCTGATGGAGACCTTTTGTTACTAGAAACTATCACAATATATGGTTGTCACAAGCTGAAATGCATATTTGGCCAACACCAAGATTTCAAATTTGCTTCACTAAAAGAAATGATGATTGGTGATTCTCCGAATTTCATTGATATTTTTCCAGAATCTTATCATTCCACACTTTCATCCATTGAAGGGTCATCTAATTCCATTTCCATGCGACAGCCACAACTGGAGCCTATCGAATCCAGCATATTCTCATTGGAATCGATTTCATACTGTCTTAACATATGGGAACATGCTCAATGGCTTTCAAGACCAACATCATATATCGCATGTCATATTAAAGTGATGACACTGGTGAATGTTTCAAAGATAAAATCAGTGCTTATTTTGTCTATTGCACCAAAAGTATTGTGGGAGATCTTGACTATTAGAAGTTGTGATGAACTGGAGCAAATCATATTAGACGTTGGAGATAGCATTGGTGGAGGCAATGTCTTTCCAAACTTAAAAGAGCTCAACGTTGAAAATTGTGATAAAATGGAATACATAGTTGGACACATTAAAGCTAGTGATGATCATCAAAATCACAATGAGGTGACCCGTATTCATTTTCCAGCTTTGGAATGTCTCAAGCTCTGGAGTCTTCCAAGTTTAATCGGCATGTGTACCAAACGTTATCGCACAACATTTCCACCTTCGGCGGTACTTAAACTCGATGATTGCTTCGTGGTTGATATTAAACCTATTGGTAATTTCACTGTTCCTTCTTCTATTTCAAGATATCATGACCGTACAACCATCAAGGTTAACGAAATAAGTGTTGAAAAAGGAACTTCATCGGCTAATGCCAAGACAATAACATCATCAAATCATTCAAAATCAGTCAATTTCAAAACACGACCCTCTTCTATTACATGTCAGTTTCCTTCAAAGCCTTATGAAGGGGACTCTTCTCATATAGAAGAAGATTTAAGTTCTTCTTTGCTTGTCGCGAGGGAGCTTGAGAAACTAGTCTCTGAGAAGTATTTGAATTATGAGAACTTTTCTTTGTTGACTGATTTCTTTGTTAAGAATCCTTCAGTTCTCTTAAAGGACACTTCATTGAGTAACAGATACAAGGGTTATGCCTACAATTGCCTAGCTGAGCTATTGAAATTCCTCCAAACGCATAATGTGTTGGATGTGTTAGGTTCAAGCCATTCTGAATTTGTTGAGTTATTACAAGATTGGATGGTGTTGAAAAGATTGTTGGACTCAAAACACATTCCGACTTAA 4014 0.3615 MGHFKKDCPEINGNSAQIVSEGYEDAGALMTLMGKLFSKAIEKSRYVFCFTCIIKEFNKEKVKLEAEMTNIRFDAKSLQEQVHKLIEENTETKKRCFFGFCPDCIWRCKRGEELTGKTEVIEKLIETAKKLKSVEFGRRLPEIEFYSGNYTSFKSRELKYKELLDAIKDENNYIIVLQGMAGIGKTTLVEQVFKQLRGSKHFEYAICVTVSFSPDIKKIQCYIAEFLGLKLEDISESDRCKKLLTRLTNGQKILVILDDVWDNLDFDVIGIPNSDNHKRCKVLVTTRNLEVCKKMACKKTIQLDILDEEEAWILFKWYARLTDISSKRILDKGHQIASECKGLPIAIAVLGNNLRAELSREKWDVALKSLQKDASMDDVDDVLVDIYKYLKLSYDYLKDEKAKELFLLCSLFVKDEEISNEILTRFGIGVGLYGEGYDKYKDARSQAVAATKKLLDSILLLETKKGDLKMHGLVHNAAQWIANKAIQRVNLSNKNQKSLVERDNNIKYLLCEGNLKDLFSSEFYGSKLEILILHVNMWGTVDIPISFLGSISGLRVLNLSNKSINLERPTLSLPQSISSLMNIRSLLVERVYLGNISILGSLQSLETLELDHCQIDELPCEIQKLKKLRLLNLEKCEIRSNNPIEVIQRCTSLEELYFCHSFNNFCQEITLPALERYRLSDGFGMMNDSLSKCVSFHHDHFTEATFKHVMQKIELLRLERVKKGWRNLMPEIVPIDQGMNDLIELHLKYDSQLQYLIYIEHIDSQVPTVFSKLVVLHLEEMENLEELCNGPISIDSMNNLEELTMECCQLLQTLSKCSLNLRNLKNMTLKSCPTLVSVFDLSTSRSLLLLESLEIIDCKILENIITCERRVEYDTREEILDGDIDNKSCSSVMFPMLKIVNIQSCPKLQFILPFISDGDLLLLETITIYGCHKLKCIFGQHQDFKFASLKEMMIGDSPNFIDIFPESYHSTLSSIEGSSNSISMRQPQLEPIESSIFSLESISYCLNIWEHAQWLSRPTSYIACHIKVMTLVNVSKIKSVLILSIAPKVLWEILTIRSCDELEQIILDVGDSIGGGNVFPNLKELNVENCDKMEYIVGHIKASDDHQNHNEVTRIHFPALECLKLWSLPSLIGMCTKRYRTTFPPSAVLKLDDCFVVDIKPIGNFTVPSSISRYHDRTTIKVNEISVEKGTSSANAKTITSSNHSKSVNFKTRPSSITCQFPSKPYEGDSSHIEEDLSSSLLVARELEKLVSEKYLNYENFSLLTDFFVKNPSVLLKDTSLSNRYKGYAYNCLAELLKFLQTHNVLDVLGSSHSEFVELLQDWMVLKRLLDSKHIPT* 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1211 1337 PRINTS Disease resistance protein signature 174 189 - -
Mtr3g1211 1337 PRINTS Disease resistance protein signature 247 261 - -
Mtr3g1211 1337 PRINTS Disease resistance protein signature 340 354 - -
Mtr3g1211 1337 PRINTS Disease resistance protein signature 819 835 - -
Mtr3g1211 1337 PANTHER - 107 967 - -
Mtr3g1211 1337 SUPERFAMILY L domain-like 469 990 - -
Mtr3g1211 1337 Gene3D - 142 302 IPR027417 -
Mtr3g1211 1337 Gene3D Ribonuclease Inhibitor 473 700 IPR032675 -
Mtr3g1211 1337 Gene3D Ribonuclease Inhibitor 737 953 IPR032675 -
Mtr3g1211 1337 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Mtr3g1211 1337 Coils Coil 54 95 - -
Mtr3g1211 1337 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 107 967 - -
Mtr3g1211 1337 Gene3D - 305 398 IPR042197 -
Mtr3g1211 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1211 Mtr-Chr3 22341150 22360788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1211 179 510 WRKY Transcription Factor Family AT5G45050 24.638 1.90e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1211 - - mtr:MTR_3g048690 2472.97