Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1192 ATGGCAACTGACGAGCATAACGTCGCAAAGGCTGAAGAATTTAAAGTCCTTGCTAATGAAGCATTCAAAGAACGGAAATTTGCCCATGCAATTGATCTATATACACAAGCAATTGAGCTAAATGGCCAAAATGCAGTTTACCTTGCTAATCGTGCCTTTGCCCATCTTAGGCTCGAGGAATATGGTAGTGCAATACTAGATGCTACAAAGGCTATCGAAGTAGATCCGAAATATTCAAAGGGTTACTACAGGCGAGGTGCTGCTCATCTTGGGCTGGGAAAATTCAAGGAAGCATTGAAAGATTTTCAGCAGGTCAAGAAAATGTGTCCAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCTGTTATGAAACTGAAATTTGAAGAAGCTATTTCTGTACCAGGATCGGTGAAGCGTCCAATAGCTGAATCCATAGATTTCCGTTCAATAGGAAAGCGCCGCAATTCTTCGGTGCCAACCGAAGTTGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGTGGTGGTCATGTTGGTCAGGACATCAAAGACCACAATAGTAGCTACAATTGTGGTTGGTTTGCTGTTGGTCCTTGGGGCATGGTGGAGTAGCTGCAATACTGGTACATTTAGGAGTCATTTACAAGACCTAGATGTCGAGCCACAGTATTCAGGAGCAAGAATAGAAGGGGATACTATTACTTTGGATTTTGTAAAGAAAATGATGGATGATTTCAAGAAACAGAAGTGCTTGCATAAACGGTATGCATTCCAGATTGTGTTGCAAACAAAAGAGATGTTGCAAGCTTTACCTTCTCTTGTCGACATAACTGTTCCTCATGGAAAACATTTTACTGTTTGTGGTGATGTGCATGGTCAGTTCTATGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATTTATGGTTTTGAGGGCGAGGTGCGCTCAAAGTTGAATGAAACATTTGTAGAACTATTTGCAGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGAGAAAGTTTTCGTAGTCCATGGGGGTCTTTTCAGTGTTGACGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGTTTGATGTGTGAGTTGCTATGGAGTGATCCACAACCTCTCCCTGGAAGAGGACCGAGCAAGCGTGGTGTAGGCCTTTCTTTTGGTGGGGATGTTACCAAAAGGTTTTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCCAACATTACTACATTTGCAGCAGTGCCACACCCTGATGTTAAGCCAATGGCTTACGCAAACAACTTCCTCAGAATGTTCTCATAA 1650 0.4152 MATDEHNVAKAEEFKVLANEAFKERKFAHAIDLYTQAIELNGQNAVYLANRAFAHLRLEEYGSAILDATKAIEVDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISVPGSVKRPIAESIDFRSIGKRRNSSVPTEVAIAAVTVAVMAVVVMLVRTSKTTIVATIVVGLLLVLGAWWSSCNTGTFRSHLQDLDVEPQYSGARIEGDTITLDFVKKMMDDFKKQKCLHKRYAFQIVLQTKEMLQALPSLVDITVPHGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1192 549 PANTHER BNAC09G39960D PROTEIN 11 173 - -
Mtr3g1192 549 PANTHER BNAC09G39960D PROTEIN 221 548 - -
Mtr3g1192 549 SMART pp2a_7 255 531 IPR006186 GO:0016787
Mtr3g1192 549 Pfam Tetratricopeptide repeat 80 112 IPR001440 GO:0005515
Mtr3g1192 549 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 221 548 - -
Mtr3g1192 549 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 11 173 - -
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 287 314 IPR006186 GO:0016787
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 317 344 IPR006186 GO:0016787
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 350 374 IPR006186 GO:0016787
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 384 410 IPR006186 GO:0016787
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 414 441 IPR006186 GO:0016787
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 470 490 IPR006186 GO:0016787
Mtr3g1192 549 PRINTS Serine/threonine phosphatase family signature 492 508 IPR006186 GO:0016787
Mtr3g1192 549 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Mtr3g1192 549 Gene3D - 210 548 IPR029052 -
Mtr3g1192 549 Pfam Calcineurin-like phosphoesterase 287 481 IPR004843 GO:0016787
Mtr3g1192 549 Pfam PPP5 TPR repeat region 217 279 IPR013235 -
Mtr3g1192 549 Gene3D Tetratricopeptide repeat domain 2 152 IPR011990 GO:0005515
Mtr3g1192 549 CDD MPP_PP5_C 227 542 IPR041753 -
Mtr3g1192 549 PIRSF PPPtase_5 1 549 - -
Mtr3g1192 549 SUPERFAMILY TPR-like 6 137 IPR011990 GO:0005515
Mtr3g1192 549 SUPERFAMILY Metallo-dependent phosphatases 235 543 IPR029052 -
Mtr3g1192 549 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Mtr3g1192 549 SMART tpr_5 45 78 IPR019734 GO:0005515
Mtr3g1192 549 SMART tpr_5 11 44 IPR019734 GO:0005515
Mtr3g1192 549 SMART tpr_5 79 112 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1192 Mtr-Chr3 21927693 21939959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1192 290 471 Calmodulin-binding Proteins AT5G63870 37.963 3.74e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1192 K04460 - gmx:100820099 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1192 3 21927693 21939959 Mtr3g1192 3 21927693 21939959 ECH