Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1191 ATGTCTTCATCAAATTCACCATGTGCAGCATGCAAGTTTCTCAGACGAAAGTGCACTCAAGAATGTGATTTTGCTCCTTACTTTCTCCCAGAAAATCCACAGCGATTCGCTAATGTTCACCGTGTCTTCGGTGCAAGCAACGTCGCTAAGCTCTTAAAAGAGCTTGACGTGAAGGACCGTGAAGACGCGGTGAAATCTTTGGCATACGAGGCAGAGTCTCGTATAAAAGACCCTGTCTATGGATGTGTAGGTCTCATCTCATATCTCCAACAGAAGTTAAGAGAAACTCAAAATGAACTCACCGTTGCGAAAAAAGAACTCGCCGGTTATAATTTGAATCCTCAAACCATGCAGTGCTTATTGATGAATTCTGGAACAGTTTTAATGCCTCAACAGCAGCAGCAGCAACAGCAACAATGGAATTCGCAGTTTGCGGCTTTTGCGAATTACCCTAACAATTTTCCTCAAGAGATGGTTGGAGGAGGTGGACTAGTTATGCAGCAGCAACAAGAACATGAGCTTCAGATGGGTGGTGGATATCAAGTTACACCACAAGAGTATTTGCTTAGGTCTGGTGGTGGATATCAGATGGGTGGTGGACTTCAGATGGGTGCTGGTGCTGGTGGTGTTGCTGTTTCTGATCATGCTGATGTGGCTCATCCTTTAGATATGGGAAATTTTGACAATGGTGCTAGTGGTGGTGCCGGCGGCGGGGTCTATTATCAGATTCCACAGCAAGGAGGAGAGCAACAACATAATTATCATGTTGGTGTTGCTCATGCTAATCCAGTTGAGGCACAGCTTTTGTTATCTCCACAGAATCAAGAAGCTGGTGAGGATGGTAAAAGTGTTGGTAGTGCTCATCGTTCAAGTTGA 876 0.4486 MSSSNSPCAACKFLRRKCTQECDFAPYFLPENPQRFANVHRVFGASNVAKLLKELDVKDREDAVKSLAYEAESRIKDPVYGCVGLISYLQQKLRETQNELTVAKKELAGYNLNPQTMQCLLMNSGTVLMPQQQQQQQQQWNSQFAAFANYPNNFPQEMVGGGGLVMQQQQEHELQMGGGYQVTPQEYLLRSGGGYQMGGGLQMGAGAGGVAVSDHADVAHPLDMGNFDNGASGGAGGGVYYQIPQQGGEQQHNYHVGVAHANPVEAQLLLSPQNQEAGEDGKSVGSAHRSS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1191 291 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 1 181 - -
Mtr3g1191 291 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mtr3g1191 291 Coils Coil 86 113 - -
Mtr3g1191 291 MobiDBLite consensus disorder prediction 271 291 - -
Mtr3g1191 291 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 181 - -
Mtr3g1191 291 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1191 Mtr-Chr3 21895402 21896968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1191 1 134 AS2 family AT5G66870 64.925 1.20e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr3g1191 LOB 9e-40 No_clan