Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1190 ATGTCTCACGCAGAAAGAAGAGTGAAACCAAAGAGCACGAAGAAGATGAAACCAAAAAAACAAGATAAGGAAAATTTGTCATCTCCTCCACCAATATTGCCTATTCACATAGAGAACAAGATCAAAGAGTTGAATGGCACTGATATCAAATATATCATGGGTAAAAAATTGTTTGCATCAAATCTCAAAGATGACCAAAATCGTCTATTAATGTCGATTAAAGAAGTCAAAGTTGATTTTCTCACCGACATAGAAAAAGACGTGTCTTTAACTAAAAAGGATGAAAATAACAAACCAGTTGGTTTAGAAGTGATTGTGTTGGACCCTTCTTTTAGAGAGTTCACAATGTCGTTGAGGAAGTGGAGCATGGGCATTAACAAGTATTACAGTCTTGTACATGGTTGGAAAACTGTTGTGAGCAAAAATAGTTTTGAAAAGGGTAAAAAACTTAACATCTGGACTTTTAGGGTCAATGACAAGTTGCACTTTGTACTCGACAATAATCAGCTTGAGAAGCAATCTTCTTTTATCACTATGGGTCAAGTTCTGTTGGTTACATAA 561 0.3512 MSHAERRVKPKSTKKMKPKKQDKENLSSPPPILPIHIENKIKELNGTDIKYIMGKKLFASNLKDDQNRLLMSIKEVKVDFLTDIEKDVSLTKKDENNKPVGLEVIVLDPSFREFTMSLRKWSMGINKYYSLVHGWKTVVSKNSFEKGKKLNIWTFRVNDKLHFVLDNNQLEKQSSFITMGQVLLVT* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1190 186 MobiDBLite consensus disorder prediction 1 32 - -
Mtr3g1190 186 Pfam B3 domain-containing protein At2g31720-like 39 140 IPR005508 GO:0003677
Mtr3g1190 186 SUPERFAMILY DNA-binding pseudobarrel domain 52 172 IPR015300 -
Mtr3g1190 186 Gene3D - 43 176 IPR015300 -
Mtr3g1190 186 PANTHER DUF313 DOMAIN PROTEIN 7 168 - -
Mtr3g1190 186 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 7 168 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1190 Mtr-Chr3 21861418 21862248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1190 41 165 B3 DNA Binding Superfamily AT1G05930 24.409 9.48e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1190 - - mtr:MTR_3g452640 321.627