Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1183 ATGATCCTATCTTTTAACTGCGCACACAATATGATGGCGAGTTTTCTGACCGATTTGGCGAAGCCTTGTGTGGACAAATTGATAAATGGGGCGATCACAGAGTCAAGTTATATATGTTGCTTCACGTGCATTGCTAAGGATTTTGAAGAAGAAAGAGCTAGATTGGAAATAGAAAAGACAACTGTTATGCAACGTGTTGATGTGGCAACCAGAAGAGGAGAGGATGTTCAAGGTAATGCTCTTTTTTGGGAAAAAGAAGCTGATAAGCTCATTCAAGAAGACACCAAAACAAATCAAAGATGTCTTTTTGGATTTTGTCCCCGTATCATATGGCAATATAGAAGGGGAAAGGAACTGACAAATAAGAACGAGCAAATCAGAAGATTGATTGAAACTGGAAAGGAACTTTCAATTGGACTCCCTGCTCGTCTTCCAGATGTAGAACGTTATTCATCCCAACACTATATTCCCTTTAAAAGCAGAGAATCAAGATACAAAGAGCTTTTGGATTCATTGAAAGATGACAACAATTATGTAATCGGGTTGAAAGGGATGGGGGGCACAGGAAAAACTACATTGGCAAAAGAAGTTGGTAAGGAACTTAAGCAATCCAAAAAATTTACTTACGTCATTGATACGACAATGTCATTATCTTTTAATATCAGTAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTAATGACTGTAGTGAATCAGACCGACCGAAGAAACTATGGAGTAGATTAACCAATGGTGAGAAGATTCTTCTAATACTGGATGATGTGTGGGGAGATATCAATTTTGTTGAAATAGGGATTCCACAAAGTGGCGATCACAATGGCTGTAGAATTCTTATAACCACACGCAGTATGTTGGTGTGTAACAAATTAGAATGCAGTAAAACAGTCCAACTAGAGCTCTTATCTGAAGAAGATGCGTGGACCATGTTCAAAAGGCATGCTGGTCTAAGCAAAAATTCAACTAAAATTTTTCTCGACAAGGGCCGTAAAATTGCAAATGAATGCAAAAGGTTACCTATTGCAATTGCTGTCATCGCCAGCAGTTTGAAGGGGATACAACGTCCGGAAGAGTGGGAATGGGCCTTAAATTCCGTGCAGAAACATATGCCAATGCACGATGTTCATGATGATGATGATCATATGGTTAAAATTTATGAATGCTTGCAGTTTAGCTATCATAATATGAAGGATGAGAAAGCTAAGAGACTATTCCTCTTGTGTTCTGTTTTTCGAGAAGATGAAGCAATTCCTATTGAAAGGTTGATCAGATTTGGCATCGGAGTAGGCCTTTTGGGGGAAGTTTATGGCAGCTACGAAAATGCTCGAAGTCAAGTTGTTATATCCAAAAATAAACTCCTAGATTCTTGTTTATTGTTGGAGGCCAATCAAAACAGTGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGCGAAGAAAGAGATTCAAACAGTGAAGTTGTATGATAAAAATCAAAAGGCAATGGTTGAAAGGGAGATGAATATTAGATATTTGTTATGTGAAGGCAAGCTTAAGGATTTGTTTTCCTTTAAGCTTGATGGTTCCAAGGTTGAGATTCTAATTGTCAATGTGCATAAAGATAAGGACTGTCACAATGTGAAAATCGAAGTCCCGAATTCATTTTTTGAGAATAGTGCGGGCCTTCGAATTTTTCATTTAATCTCTCCTCGTTTTTCTAAACTATATCTATCATTACCTCTATCAATTCAGTCATTGAAGAATATTCGGTCTCTTCTTTTTACGCATGTCTTTTTGGGTGACATCTCTATTTTGGGAAACCTGCAAAGCCTTGAGACTCTTGATCTGGATGATTGTGATATTGATGAATTACCTCATGGAATCACAAAACTAGATAAACTGAAATTATTGAACTTGACAAATTGTAGAATTTCAAGGAATAATCCTTTTGAAGTGATTGAAGGATGCTCATCACTTGAAGACTTGTATTTCAGAGGTAGTTTTAATGGTTTTTGCAGAGAAATAACTTTCCCTAAATTGCAAAGGTTCTATATAGATGATCAATTTTGCAGTTCAGTGGATGAATTATCATCAAAGTGTGTGTTTCTTAAAGTTAGAATTGACATTTTCCTATCTGAAACAACACTCAAGTACTGTATGCAAGAAGCAGAGGTGCTTAAACTAAGAAGAATCGAGGGGGGATGGAGAAATATCATACCTGATATTGTTCCGTTGAATCAAGGTATGAATGATTTAGTTGAGCTTCAATTACAATTTATTTCACAACTGCGGTGCCTCATTGACACTAAGCATATTGCTTCTCAAGTACCAAATGTCTTCTCCATGTTGGTTGTACTAGATCTTTGGAGGCTAGAAAATTTGAAAGAATTGTTCAATGGCCCTCTTTCTTTTGACTCTCTAAACAGTTTAGAGAAGTTGTCCATCAAGGATTGCAAACATTTGCAAAGCTTATTTAAGTGCAACCTAAACCTATTCAATCTAAAGAGTGTGTCGCTGGAAAAATGCCCGATGTTGATGTCCTTATTTCATCTGTCAACTGCTGTTAGCCTAGTGTTGTTGGAGAGATTGGAAATAGAGGACTGTGGATGTCTTGAATACATAATAGATGAAAGAAAAGGGGAGGAATCAAGAGGTGAAATAGTTGATGATAATGACAACACAAGTCATGGCGCAATGCTTCAGAATCTGAAAGTTCTTAATATTAAGAATTGTCCAAGGATTGAATTAATACTTGCATTTCACTCTGCTCATGATCTACCAGCATTAGAATCCATCACAATAGAACATTGTGATAAGGTGAAATACATATTTGACCAAGATCTCAAACTTGGTTCCCTCAAACAATTCAAGCTTCATGGCATACCGAATTTGATCGACATTTTCCCTGAATGTAATCGTACCATGTCTTTCGCCATTAAGGAAGCATCTTCCATATCTGGATATGCTTCCCAGCCACAAGAAAAATCAGACCCTATCAAATGCAATATCTTTTCATGGACTAATGTATATTGTTGGGGTAAAAAAAATGGGCACAAATTGAGGAGTACCACAAGTAATCAATTTCAAGTTCCGGACAACTTAATGGAATCAAATTCATATCCCCTTAACATATGGGAACGTGCTCAATGTCTTTCAAGACCAGCACTCTTGTGCAATGTTGAAGAGATTACATTGAAGAATGTTTCAAAGATGAAATCGGTATTTATCCTATCTACAAAATCAAGAATGTTGTTGAAAACTTTGAAAGTTCTGAACTGTGATGAATTGAGGTACATTATAATAATAGACACTAGAGATCATCATGAAAGCACTAGTGGCAACAACTGGGGCACTGTCTTCCCAAAATTAACACATGTTGAAGTTGAAGATTGTGAGCAATTGGAATACATAATTGTACATGATGATCATCTTCATTTTCAACTTCCAGAATTGGAATGGCTTTCTCTTTGGAATCTGCCAAGTTTAGTTGGCATGTGTCCTAAACAATATTACACAACAGCTCCAACTTTGAAAGGGTTTCAACTCCATAAATGCACGCAGTTTAATATAAAATCTATTGGTGATTGCATAACTCATCATTCATTAACAAGATCTCTGAACAATACAATCATCAAGGAATTGAGTGGGGATGTGGAACATTTTCGTGCTTTGGAAACACTCAATGTAAACAAAAACTCTAAAGTAGAAAGTATATTTTGTCTCAATGAAAGAAATGAACAGCAAATGAACTTAGCTTTGGAAGAAATTATTTTGGGTGTTCTGCCTATGATGACATACCTTTTTGTGGGTCCCAAAAATTCGTTTTCCCTCCAAAACCTTACTGATTTAACAGTCAAGCGATGTGAAAAATTGATAATTGTTTTCTCTAATTCTATAATAAGGTGTCTACCACAATTGCGTCATATGAGAATTGAAGAATGCAAAGAGTTGACACATATTTTTGAAGATGATTTGGAGAATAAAAAATCCTCAAATTTTATGTCTACAACAAAGACATGCTTCCCAAAGCTAAGAACACTTGCTGTGCAAAAGTGCAACAAGTTGTTATATGTCTTTCCAATCTCCATATGTAAAGAGCTTCCTGAGCTAGAGGGTCTAATGATAAGAGAAGCATATGAGCTAGAGGAAATATTTGGAAGTGAAGGTGATGAGAAAGTCAATATTCCGAAACTGAAAGTTGTGGCATTTGTCAACCTACCAAGCCTTTGTCAAGCTCAAGGAATTCAATTTCAAGCTGTAAAACATCGTTTCATACGGAATTGTCAAAAACTCTCTCTGGCTTCAGCAACAACAGCAGACCTCAAAAATGATATTCGTGGTTTATTATCTTTCCACGGTTTTGAATTGCACAATGATTTGACGAAGCTATTCGACCAATTACATGATGAGCCTGAAGGCCACGATAAGAGTTCAGAAATCACTTTCGTTCAAACAGCATCAAGACACAAGTTGACTTCTTCACAGAAAGAAATGGAACAAACAATAGAGACAGAGCATGAATTTGTTGAAAATGTTCCTCGACGAGAAATGCCATCAGTAGCAGTAATACAAAAAATTTCTGATTTGGCGAAACTGGTGCAACAACATGAACTTGGAGAAACTGATGCTACCGTCAAACCTTCTCAGGAAAATAATGTGGAGGGTTCAACTTTGTCCGCCACTTCAGAAACAACGAATGAGCTACCTATACAATTAGTTGCTCTTAAACGAAAGGCACTTCAGAAACATCTCATTTTGCTTGGTAACGAAATAAGTGTTGAAGAAGGAACCACATCAGCTAATGCCAAGAGAATAACTTCAGCAGCTCATTCAAAATCAGTCAATTCATCATTAAGTCAATTAGCTACTTCTAAGCATAAAACGACTTCACAGGAAGACGGTGATGTCCAAATAGCCATAGCTTCTCCTCCAATAGCCACTCAAGATGTTGATGTTGAAATCTGGCAGGAAACTAGAAAGACTAATGATGACCAAGTTTCTCTAAATGATGATGATGTTGTGAAAGTAAGCTCAAATATTGAGGATCAATTTCCTAAAAATGATGAAATATTAGTTTCCAAATCAATACCATCTTGTATTGCATCCCAGTATCCTTCAAAGCCTACTGGAGAGGACCCTTCTCAAAAAGAAGATTTCAGTTCTTCTTTGTTTGTCAAGAGGGAGCTTGATCAACTAGTCTCCAAGAAGCATTTCGATTATGAGAACTTGTCTTTTTTGACTGATTTCTTTGTTAAGCATCCTTCAATTCTTTTAAAGGACACTTCATTGAGTAACAGATACAAGGGTTATGCCTACAATTGCCTAGCTGAGCTATTGAAATTCCTTCAAACTCGTAGTGTGTTGGATGTGTTAGGTTCAAGCAACTCTGAATTTGTCGAGTTATTACAAGATGTGCGCAGATTTCCTTTTGATAAGAAATGGTTGGATGGTGTTGAAAAGCGCGCTTTGTTTCCTGGTTTACAAGTCTCTCAAGATGCATTGCAAAAATTGTTGGACTCAAAACATATTTTGACACAACATGTGATGGATCTTAAGCATCAATTGGATTCCTCTGAAGCTGTTTTGCAGAACATCACTCAACAGGAGGCACAAATTTTACAAACTCGAGCTGCTTTAAGTGATCCTATTGGCTATTAG 5673 0.3679 MILSFNCAHNMMASFLTDLAKPCVDKLINGAITESSYICCFTCIAKDFEEERARLEIEKTTVMQRVDVATRRGEDVQGNALFWEKEADKLIQEDTKTNQRCLFGFCPRIIWQYRRGKELTNKNEQIRRLIETGKELSIGLPARLPDVERYSSQHYIPFKSRESRYKELLDSLKDDNNYVIGLKGMGGTGKTTLAKEVGKELKQSKKFTYVIDTTMSLSFNISKIQDDIAGPLGLKFNDCSESDRPKKLWSRLTNGEKILLILDDVWGDINFVEIGIPQSGDHNGCRILITTRSMLVCNKLECSKTVQLELLSEEDAWTMFKRHAGLSKNSTKIFLDKGRKIANECKRLPIAIAVIASSLKGIQRPEEWEWALNSVQKHMPMHDVHDDDDHMVKIYECLQFSYHNMKDEKAKRLFLLCSVFREDEAIPIERLIRFGIGVGLLGEVYGSYENARSQVVISKNKLLDSCLLLEANQNSVKMHDLVRDAAQWIAKKEIQTVKLYDKNQKAMVEREMNIRYLLCEGKLKDLFSFKLDGSKVEILIVNVHKDKDCHNVKIEVPNSFFENSAGLRIFHLISPRFSKLYLSLPLSIQSLKNIRSLLFTHVFLGDISILGNLQSLETLDLDDCDIDELPHGITKLDKLKLLNLTNCRISRNNPFEVIEGCSSLEDLYFRGSFNGFCREITFPKLQRFYIDDQFCSSVDELSSKCVFLKVRIDIFLSETTLKYCMQEAEVLKLRRIEGGWRNIIPDIVPLNQGMNDLVELQLQFISQLRCLIDTKHIASQVPNVFSMLVVLDLWRLENLKELFNGPLSFDSLNSLEKLSIKDCKHLQSLFKCNLNLFNLKSVSLEKCPMLMSLFHLSTAVSLVLLERLEIEDCGCLEYIIDERKGEESRGEIVDDNDNTSHGAMLQNLKVLNIKNCPRIELILAFHSAHDLPALESITIEHCDKVKYIFDQDLKLGSLKQFKLHGIPNLIDIFPECNRTMSFAIKEASSISGYASQPQEKSDPIKCNIFSWTNVYCWGKKNGHKLRSTTSNQFQVPDNLMESNSYPLNIWERAQCLSRPALLCNVEEITLKNVSKMKSVFILSTKSRMLLKTLKVLNCDELRYIIIIDTRDHHESTSGNNWGTVFPKLTHVEVEDCEQLEYIIVHDDHLHFQLPELEWLSLWNLPSLVGMCPKQYYTTAPTLKGFQLHKCTQFNIKSIGDCITHHSLTRSLNNTIIKELSGDVEHFRALETLNVNKNSKVESIFCLNERNEQQMNLALEEIILGVLPMMTYLFVGPKNSFSLQNLTDLTVKRCEKLIIVFSNSIIRCLPQLRHMRIEECKELTHIFEDDLENKKSSNFMSTTKTCFPKLRTLAVQKCNKLLYVFPISICKELPELEGLMIREAYELEEIFGSEGDEKVNIPKLKVVAFVNLPSLCQAQGIQFQAVKHRFIRNCQKLSLASATTADLKNDIRGLLSFHGFELHNDLTKLFDQLHDEPEGHDKSSEITFVQTASRHKLTSSQKEMEQTIETEHEFVENVPRREMPSVAVIQKISDLAKLVQQHELGETDATVKPSQENNVEGSTLSATSETTNELPIQLVALKRKALQKHLILLGNEISVEEGTTSANAKRITSAAHSKSVNSSLSQLATSKHKTTSQEDGDVQIAIASPPIATQDVDVEIWQETRKTNDDQVSLNDDDVVKVSSNIEDQFPKNDEILVSKSIPSCIASQYPSKPTGEDPSQKEDFSSSLFVKRELDQLVSKKHFDYENLSFLTDFFVKHPSILLKDTSLSNRYKGYAYNCLAELLKFLQTRSVLDVLGSSNSEFVELLQDVRRFPFDKKWLDGVEKRALFPGLQVSQDALQKLLDSKHILTQHVMDLKHQLDSSEAVLQNITQQEAQILQTRAALSDPIGY* 1891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1183 1890 Coils Coil 45 65 - -
Mtr3g1183 1890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 417 IPR027417 -
Mtr3g1183 1890 SUPERFAMILY RNI-like 1210 1385 - -
Mtr3g1183 1890 MobiDBLite consensus disorder prediction 1612 1638 - -
Mtr3g1183 1890 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 67 975 - -
Mtr3g1183 1890 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1279 1337 - -
Mtr3g1183 1890 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1329 1417 - -
Mtr3g1183 1890 Gene3D - 401 488 IPR036388 -
Mtr3g1183 1890 Gene3D - 310 400 IPR042197 -
Mtr3g1183 1890 Coils Coil 1853 1873 - -
Mtr3g1183 1890 Gene3D - 145 307 IPR027417 -
Mtr3g1183 1890 PANTHER - 67 975 - -
Mtr3g1183 1890 PANTHER - 1329 1417 - -
Mtr3g1183 1890 PANTHER - 1279 1337 - -
Mtr3g1183 1890 Pfam NB-ARC domain 166 404 IPR002182 GO:0043531
Mtr3g1183 1890 Gene3D Ribonuclease Inhibitor 545 727 IPR032675 -
Mtr3g1183 1890 Gene3D Ribonuclease Inhibitor 899 985 IPR032675 -
Mtr3g1183 1890 Gene3D Ribonuclease Inhibitor 729 888 IPR032675 -
Mtr3g1183 1890 SUPERFAMILY L domain-like 477 974 - -
Mtr3g1183 1890 CDD AAA 161 291 - -
Mtr3g1183 1890 MobiDBLite consensus disorder prediction 1612 1632 - -
Mtr3g1183 1890 Gene3D Ribonuclease Inhibitor 1052 1421 IPR032675 -
Mtr3g1183 1890 PRINTS Disease resistance protein signature 179 194 - -
Mtr3g1183 1890 PRINTS Disease resistance protein signature 252 266 - -
Mtr3g1183 1890 PRINTS Disease resistance protein signature 345 359 - -
Mtr3g1183 1890 PRINTS Disease resistance protein signature 611 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1183 Mtr-Chr3 21600498 21609790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1183 180 598 WRKY Transcription Factor Family AT5G45050 22.018 8.60e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1183 - - mtr:MTR_3g062420 2343.54