Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1145 ATGGACCTGAAGGGAACAAGTCCCCATGAGACAAGGAAATTTGAGTTTTCAAGCTTGAATATGGCTTATGAGTTCTATAATTGGTATGCTAGAATGAATGGGTTTGCGGTCCGCAAGAGCAAGATGATTAAAAGCAATAAAGGGGAAATATTACAGCAAACCTTTGTCTGCCACAGACAAGGGTTTAGGGAGAATAAAGGTTTAACAATAGAAAACCGGAAGCGTGAGTGTAAACCCGAGACTCGGTGTGGATGTGAAGCAAAATTTTGGGTGCATATAGATATGTTCTCACAACGTTGGTTGATAACTGTTTTTACCGATCAACACAACCATGAGCTTTTAGATGAAGAGTACCATGGAATGCTTGCTGCACATCGAAAAATGAAAGAGTCGGATATAATGCAGATGAACGACATGTTGAAGGTTGGGATAGGGCCGTCTCAATTCTATAGTTCTTTGGCAAACCAATCAGGAGGGTATGAAAAGATAGGGTTTCGAAAGAAGGATATATATAATCAGATAGGAAAGGAACGCCTTTTGAAACGGTGTGATGGTAAAAATGCTTTACAATATCTTCATGGGCTGGCATCAAATGACTCGTTGATGTTTTATCGCCACACCGTTGACGGAGAAGGTAGGCTTGAACACCTGTTTTGGTGCGACGGTATTAGCCAAATGGATTATGGTGTCTATGGTGATGTGTTGGCATTTGATGCAACATATGGAACGAACAAATATCATTGTCCCTTAGTGGTGTTTTCTGGCGTTAATAACCATAATCATAATGTTATATTTGCTGGTGTTGTTGTTGCAAATGAAAAGGAAGAAACTTATGTGTGGGTTCTTGAACAATTTTTGGAAGCAATGTCAGGCAAGTCGCCTATATCTGTCATTACTGATGGAGATCTTGCAATGAAGAATGCTATTAAAAAGGTGTTTCCAAATGCTTATCATAGATTGTGTGCTTGGCATCTAATTCGCAATTAA 987 0.3941 MDLKGTSPHETRKFEFSSLNMAYEFYNWYARMNGFAVRKSKMIKSNKGEILQQTFVCHRQGFRENKGLTIENRKRECKPETRCGCEAKFWVHIDMFSQRWLITVFTDQHNHELLDEEYHGMLAAHRKMKESDIMQMNDMLKVGIGPSQFYSSLANQSGGYEKIGFRKKDIYNQIGKERLLKRCDGKNALQYLHGLASNDSLMFYRHTVDGEGRLEHLFWCDGISQMDYGVYGDVLAFDATYGTNKYHCPLVVFSGVNNHNHNVIFAGVVVANEKEETYVWVLEQFLEAMSGKSPISVITDGDLAMKNAIKKVFPNAYHRLCAWHLIRN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1145 328 Pfam MULE transposase domain 234 328 IPR018289 -
Mtr3g1145 328 PANTHER OS02G0262500 PROTEIN 15 328 - -
Mtr3g1145 328 Pfam FAR1 DNA-binding domain 24 114 IPR004330 -
Mtr3g1145 328 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 328 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1145 Mtr-Chr3 20520535 20521521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g1145 MULE 1.7e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1145 - - mtr:MTR_1g070355 505.368