Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1106 ATGGGTATTGGAAATGGAGATAATTTCATTGTGAGTGTGACAAATGAAGAGGTAGTGGCAGCAGTGTTACCAATACAAGAACATTGGCTACCACTCTCTAACCTTGATTTACTTCTACCTGCAGTGGATGTTGGTGTGTTCTTTTGTTACAAGAATCCCATGATATTAACCTTTGAATCTATGGTTGTGTCTCTCAAGAAGGCATTGGCTAAGGTTTTGGTCTCATACTATGCCTTTGCAGGTGAAGTTGTGTCCAATTCTGTGGGTGAACCTGAGCTTCTTTGTAATAATCGTGGTGTTGATTTTGTTGAAGCTGTTGCTGATGTTGAACTTCAATGCCTCAATTTTTATAACCCTGATGAATCTGTTGAAGGAAAGTTTGTTCCTAAGAAGAAGCATGGCGTGCTCGCAATCCAGGCAACTTCATTAAAGTGTGGTGGGATAGTAGTGGCATGCACATTTGATCATCGCATAGCAGATGCATATTCAACAAACATGTTCCTAGTATCATGGGCCGAGATGGCCCACCCAGTAAAGCCCATCAAGCCCACAACAATAACAATCACTAATAAACCATGTTTTCGTCGCTCCCTCCTCAGCCCTCGTCATCCAAGTTTCATCCACCCTTCCCTTGACGATATGTACATTCCCATTTCCAAACTCCCTCCTCCTTCGGCCACTGCTACAAAGCCGTTACTTAGCCGAATATACTACGTCACCGCAGAGGAGCTCCACCGCTTGCAATCACTCGGTGCTTCGGCTAAAAATGGCACCACTAAGCCTTCGAAGCTTGAGTCTTTTTCCGCCTACTTGTGGAAGTTGGTTGCTAAAGCAGTCACAAGGGACGGTAGTAAAATGGTCATTGCCAAAATGGGCATAGTGGTTGATGGAAGAAGGAGAATTGCCAACAATAGTAGCGATGAGGACCGGGGAGAAGCATTGATGACACACTATTTTGGTAATGTTCTTTCTATCCCATTTGGCGGGAAATCAGTGGAGGAGTTGGTCGATAAGCCATTAGGGTGGGTGGTTGACGAGGTTCGCGAGTTTGTGTCAGTAGCAACAACTGAGGAACATTTCCTAGGGCTCATTGATTGGGTGGAAGCACATCGACCTGTTCCTGGATTGGCGAAGATTTATAGTGGTGGCACCAATGAAGGGCCGGCTTTTGTGGTATCTTCCGGGCAAAGATTTCCGGAAGACAAGGTGGATTTTGGATGGGGAAAAGTTGTGTTTGCATCCTACCATTTTCCTTGGGGAGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTCTAAGGAATGGTGATTGGGTTGTTTACATGCATCTTTTGAAAGAGCAATTGGACATCATAGAGTCTGAGGCAGATCATGTCTTTATGCCTTTGACTTGGGATTATCTCAATCAATGA 1413 0.4487 MGIGNGDNFIVSVTNEEVVAAVLPIQEHWLPLSNLDLLLPAVDVGVFFCYKNPMILTFESMVVSLKKALAKVLVSYYAFAGEVVSNSVGEPELLCNNRGVDFVEAVADVELQCLNFYNPDESVEGKFVPKKKHGVLAIQATSLKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAHPVKPIKPTTITITNKPCFRRSLLSPRHPSFIHPSLDDMYIPISKLPPPSATATKPLLSRIYYVTAEELHRLQSLGASAKNGTTKPSKLESFSAYLWKLVAKAVTRDGSKMVIAKMGIVVDGRRRIANNSSDEDRGEALMTHYFGNVLSIPFGGKSVEELVDKPLGWVVDEVREFVSVATTEEHFLGLIDWVEAHRPVPGLAKIYSGGTNEGPAFVVSSGQRFPEDKVDFGWGKVVFASYHFPWGGEAGYVMPMPSPLRNGDWVVYMHLLKEQLDIIESEADHVFMPLTWDYLNQ* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1106 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 465 - -
Mtr3g1106 470 Pfam Transferase family 11 458 - -
Mtr3g1106 470 Gene3D - 6 212 IPR023213 -
Mtr3g1106 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 465 - -
Mtr3g1106 470 Gene3D - 217 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1106 Mtr-Chr3 19230194 19234995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1106 20 453 Monolignol Biosynthesis Gene Families AT5G48930 26.622 1.09e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1106 - - gmx:100785067 681.789