Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1105 ATGGGTATTGGAAATGGAGATAATTTCATTGTGAGTGTAACAAATGAAGAGGTAGTGACAGCAGTGTTACCAATAAAAGAACATTGCCTCCCACTCTCTAATCTTGACTTACTTCTACCTGCATTGGATGTTGGTGTGTTCTTTTGTTACAAGAATCCAATGTTATTGTCCACTTCAACAACGTTATTAACCTTTGATTCTATGGTTGTGTCTCTCAAGAAGGCATTAGCTAAGGTTTTGGTCTCATACTATGCATTTGCAGGTGAAGTTGTGTCCAATTCTGTGGGTGAACCTGAGATTCTTTGTAATAACCGTGGTGTTGATTTTGTTGAAGCTGTTGCTGATGTTGAGCTTCAATGCCTCAATTTTTATAACCCTGATGAATCTGTTGAAGGAAAGTTTGTTCCTAAGAAGAAGCATGGCGTGCTCGCAATCCAGGCAACTTCATTAAATTGTGGTGGGATTGTAGTGGCATGCACATTTGATCATCGCATAGCAGATGCCTACTCAACAAACATGTTCTTAGTATCATGGGCCGAGATGGCTCATCCAACAAAGTCCAAATCAATAACAATGACTAATGAACCATGTTTTCGTCGCTCCCTCCTCAACCCTCGTCATCCAGGTTCCATCCATCCTTCCCTTGATGACATGTACATTCCCATTTCCGAACTCTCTCCTCCTTCGGCCACCACTGCAAAGTCGTTACTTAGCCGCATATACTTCGTCACCTCAGAGGAGCTCTATCGCTTGCAATCACTCGCGGATTGGACCAACAATGGTACCACTAAGCCCACGAAGCTTGAATCGTTTTCTGCTTACTTGTGGAAGTTAGTTGCTAATTCAGCTACAAGGGGTGGTAGTAAAATGGGCATTGCCAAAATGGGTATAGTGGTTGATGGAAGAAGGAGACTTGGCAACGATAGTAGTGATGGGGATGGGAGAGAAGCAATGATGACCCACTATTTTGGTAATGTTCTTTCTATCCCATTTGGCGGGAAATCAGTGGAGGAGTTGATCGATAAGCCATTAGGGTGGGTGGTTGATAAGGTTCGTGAGTTTGTATCGGTAGCAACAACGGAGGAGCACTTCTTAGGGCTCATTGACTGGGTGGAAGCACACCGACCTGTACCTGGATTGACGAAGATTTATTGTGGCGACCCCAATGAAGGGCCGGCTTTTGTGGTATCTTCCGGGCAAAGATTTCCAGAAGACAAGGTGGATTTTGGATGGGGAAAAGTTGTGTTTGCATCCTACCATTTTCCATGGGGTGGTGAAACTGGTTATGTGATGCCAATGCCAAGCCCTTTAAGGAATGGTGATTGGATTGTTTATATGCATCTTTCAAAAGAGCAATTGGAGATCATAGAGTCCGAGGCAGATCATGTCTTTAAGCCTTTGACTTGGGATTATCTCAATCAATGA 1425 0.4358 MGIGNGDNFIVSVTNEEVVTAVLPIKEHCLPLSNLDLLLPALDVGVFFCYKNPMLLSTSTTLLTFDSMVVSLKKALAKVLVSYYAFAGEVVSNSVGEPEILCNNRGVDFVEAVADVELQCLNFYNPDESVEGKFVPKKKHGVLAIQATSLNCGGIVVACTFDHRIADAYSTNMFLVSWAEMAHPTKSKSITMTNEPCFRRSLLNPRHPGSIHPSLDDMYIPISELSPPSATTAKSLLSRIYFVTSEELYRLQSLADWTNNGTTKPTKLESFSAYLWKLVANSATRGGSKMGIAKMGIVVDGRRRLGNDSSDGDGREAMMTHYFGNVLSIPFGGKSVEELIDKPLGWVVDKVREFVSVATTEEHFLGLIDWVEAHRPVPGLTKIYCGDPNEGPAFVVSSGQRFPEDKVDFGWGKVVFASYHFPWGGETGYVMPMPSPLRNGDWIVYMHLSKEQLEIIESEADHVFKPLTWDYLNQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1105 474 Pfam Transferase family 11 462 - -
Mtr3g1105 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 469 - -
Mtr3g1105 474 Gene3D - 222 459 IPR023213 -
Mtr3g1105 474 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 469 - -
Mtr3g1105 474 Gene3D - 10 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1105 Mtr-Chr3 19202210 19212667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1105 33 457 Monolignol Biosynthesis Gene Families AT5G48930 25.909 6.21e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1105 - - gmx:100785067 672.159