Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1079 ATGACATGTTATTTTATTTTCTCTAAACAAATTCTCTCTCAAAAAAAAAAAAAAATGGCCACTCCTCTCATTTTCTACCTTCTACTTGTTTCCTTCACAAGTTTTTCTTTTGTTTCTTCACTTCAACTTTCTTTGAAAAATCAAGCTTCAATCTTAGTTTCAATGAAACAGGATTTTGAACCTTCTTCTAACACTTCTTTAAGTAGTTGGAACATGTCTAATTACATGTCACTTTGTACTTGGTATGGAATTCAATGTGACCATACCATTACCAACATGTCTATAGTTTCACTTGATATTTCAAATTTGAACATTTCAGGTTCATTTTCACCTCAAATCACAAAACTCTACAATCTTGTAAATGTTTCGATCCAAGGAAATAGCTTCTATGGTGAGTTTCCAACTGAAATTCACAAGCTACAAAGATTGAAATGCCTCAACATATCGAACAATATGTTTAGTGGAAACTTGAGTTGGGAATTCAACAAATTGAAAGAGCTTGAAGTGTTGGATATTTACAACAACGGTTTTAACGGTTCGCTTCCTCGTGGTGTTACTCAAGTTTCAAGTCTCAAGCATCTGAATTTTGGAGGGAATTACTTTTCTGGAAAAATTCCTACAAGTTATGGAGAAATGAAACAGCTTAATTTTTTGTCTCTTGCTGGAAATGATTTGAGTGGTTTTTTACCTAGTGAGCTTGGAAATTTGACTAGTTTGGAAAATCTTTATTTAGGTTATTTCAATCAATTTGATGGTGGAGTTCCAAAAGAGTTTGGTAAGTTGATTAATTTGGTTCATTTAGACCTAGCAAGTTGTTTCTTGAAAGGTTCAATTCCACTTGAGTTAGGTCAACTTAACAAGCTAGATACACTTTTCTTGCAAAAAAATCAACTCACTGGTTTTATTCCACCTGAATTAGGTAATTTGAGTAGATTGAATGCTCTTGATTTATCACTCAATAACCTAACAGGAGGAATTCCGAACGAATTCTCGAATCTTCGAGAACTTTCTCTTTTGAACTTGTTTATCAATAAATTTCACAGCGAAATTCCTGATTTCATTTCCGAGCTTCCTAAATTGGAAGTTCTTAAGCTTTGGAGGAATAACTTTACTGGCGTTATTCCTTCGAAGCTAGGTCAAAATGGAAGATTAACTGAGGTTGATTTATCGACAAATAAACTCACTGGAATATTGCCAAAATCACTTTGCTTTGGGAAGAGACTAAAGATTTTGATCTTGCTTAACAACTTTTTGTTTGGTTCTTTACCTAATGATCTTGGTCAATGCTACACACTCCAAAGAGTTAGAATTGGTCAAAACTATTTCACTGGTTCAATTCCACATGGTTTTCTTTACTTACCAAATCTATCTCTTTTGGAACTACAAAACAATTATCTCAGTGGTGTGATTCCACAACAAACACATAAAAACAAAACCTCCAAATTAGAACAGTGTAATCTATCAAACAATAGGTTATCAGGTTCTTTACCAACCTCAATTGGAAATTTTCCAAATTTGCAAACTCTTCAACTTAGTGGAAACAGATTCTCAGGCCAAATTCCATCAGATATAGGAAAACTCAAAAAAATTCTCAAATTAGATATAAGCAGTAACAACTTTTCAGGTACTATTCCAAGTGAAATAGGTAAATGTACCTTACTAACTTATTTGGATTTGAGCCAAAACCAATTTTCAGGTCCTATTCCAATTCAACTTGCTCAAATTCATATACTAAACCATCTTAATGTTTCATGGAATCACTTAAACCAAAGCATTCCTAAAGAGCTAGGAGCCTTAAAGGGCTTAACTTCAGCAGATTTCTCTCATAATAACTTCTCCGGTTCGATACCAGAAGGAGGACAATTTTCAACTTTTAAGGCAAATTCCTTTGAAGGTAATCCTCAACTATGTGGTTATGTGTTGGTTGAGTTCAATCCATGCAAAGTTTCTTCAACAGATGAATTAGAATCTCAACAGAAGAACGGTTCGAGAAACGGTTTCCCTGGAAAGTTTAAGTTGCTTTTCGCGTTGGCGTTATTGTTATGTTCGTTGGTTTTTGTAACTTTAGCTATCATGAAGAGTAGAAAATCAAGGAGGAATCATTCAAGTTCATGGAAATTAACAGCATTTCAGAAGATGGAATATGGAAGTGAAGAAATCATAGGTTGCATAAAGGAAAGCAATGTGATAGGAAGAGGTGGAGCAGGTGTTGTGTACAAAGGAACAATGCCAAATGGAGATGAAATTGCTGTGAAGAAATTGTTAGGAATCAACAAAGGAAATTCTTCTTCTCATGCCGATAACGGCTTTTCAGCAGAAATTAAGACATTAGGTAGAATCAGACACAGGTATATTGTTAGGTTGGTTGCATTTTGTACAAACAAAGAAACAAATTTGCTTGTTTATGATTACATGGAAAATGGTAGCCTTGGTGAAGTTTTGCATGGAAAAAGAGGTGAGTTTTTGAAATGGAATGTTAGGTTGAAAATTGCTGTTGAAGCTGCTAAAGGACTTTGTTATTTGCATCATGATTGTTCACCTTTGATCATTCATAGAGATGTTAAGTCAAATAATATATTGTTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATAATGGGAATTCAGAATGCATGTCTTCTATTGCTGGTTCTTATGGATATATTGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTGCTAGAACTCATCACAGGGAAAAGGCCAGTGGGGGATTTTGAGGAAGAAGGTTTAGACATTGTTCAATGGACCAAAATGAAAACTAATTGGAACAAAGATATGGTGATGAAGATCCTTGATGAGAGGCTACCTCAAATTCCTTTACATGAAGCAAAACAAGTGTTTTTTGTGGCAATGTTATGTGTTCATGAACATAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAGATGCTTGCACAAGCAAAGTAA 3012 0.3466 MTCYFIFSKQILSQKKKKMATPLIFYLLLVSFTSFSFVSSLQLSLKNQASILVSMKQDFEPSSNTSLSSWNMSNYMSLCTWYGIQCDHTITNMSIVSLDISNLNISGSFSPQITKLYNLVNVSIQGNSFYGEFPTEIHKLQRLKCLNISNNMFSGNLSWEFNKLKELEVLDIYNNGFNGSLPRGVTQVSSLKHLNFGGNYFSGKIPTSYGEMKQLNFLSLAGNDLSGFLPSELGNLTSLENLYLGYFNQFDGGVPKEFGKLINLVHLDLASCFLKGSIPLELGQLNKLDTLFLQKNQLTGFIPPELGNLSRLNALDLSLNNLTGGIPNEFSNLRELSLLNLFINKFHSEIPDFISELPKLEVLKLWRNNFTGVIPSKLGQNGRLTEVDLSTNKLTGILPKSLCFGKRLKILILLNNFLFGSLPNDLGQCYTLQRVRIGQNYFTGSIPHGFLYLPNLSLLELQNNYLSGVIPQQTHKNKTSKLEQCNLSNNRLSGSLPTSIGNFPNLQTLQLSGNRFSGQIPSDIGKLKKILKLDISSNNFSGTIPSEIGKCTLLTYLDLSQNQFSGPIPIQLAQIHILNHLNVSWNHLNQSIPKELGALKGLTSADFSHNNFSGSIPEGGQFSTFKANSFEGNPQLCGYVLVEFNPCKVSSTDELESQQKNGSRNGFPGKFKLLFALALLLCSLVFVTLAIMKSRKSRRNHSSSWKLTAFQKMEYGSEEIIGCIKESNVIGRGGAGVVYKGTMPNGDEIAVKKLLGINKGNSSSHADNGFSAEIKTLGRIRHRYIVRLVAFCTNKETNLLVYDYMENGSLGEVLHGKRGEFLKWNVRLKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDNGNSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKRPVGDFEEEGLDIVQWTKMKTNWNKDMVMKILDERLPQIPLHEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAK* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1079 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Mtr3g1079 1003 ProSiteProfiles Protein kinase domain profile. 724 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1079 1003 SUPERFAMILY RNI-like 97 403 - -
Mtr3g1079 1003 SUPERFAMILY RNI-like 303 619 - -
Mtr3g1079 1003 PANTHER UNNAMED PRODUCT 19 1003 - -
Mtr3g1079 1003 SMART serkin_6 724 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1079 1003 SUPERFAMILY Protein kinase-like (PK-like) 716 999 IPR011009 -
Mtr3g1079 1003 Gene3D Ribonuclease Inhibitor 383 648 IPR032675 -
Mtr3g1079 1003 Pfam Protein tyrosine and serine/threonine kinase 726 999 IPR001245 GO:0004672|GO:0006468
Mtr3g1079 1003 Pfam Leucine rich repeat N-terminal domain 46 87 IPR013210 -
Mtr3g1079 1003 SMART LRR_typ_2 357 381 IPR003591 -
Mtr3g1079 1003 SMART LRR_typ_2 575 599 IPR003591 -
Mtr3g1079 1003 SMART LRR_typ_2 285 309 IPR003591 -
Mtr3g1079 1003 SMART LRR_typ_2 164 188 IPR003591 -
Mtr3g1079 1003 SMART LRR_typ_2 212 236 IPR003591 -
Mtr3g1079 1003 SMART LRR_typ_2 503 527 IPR003591 -
Mtr3g1079 1003 SMART LRR_typ_2 453 476 IPR003591 -
Mtr3g1079 1003 Gene3D Ribonuclease Inhibitor 304 382 IPR032675 -
Mtr3g1079 1003 Gene3D Ribonuclease Inhibitor 207 303 IPR032675 -
Mtr3g1079 1003 Gene3D Ribonuclease Inhibitor 45 206 IPR032675 -
Mtr3g1079 1003 Gene3D Phosphorylase Kinase; domain 1 690 804 - -
Mtr3g1079 1003 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 19 1003 - -
Mtr3g1079 1003 Gene3D Transferase(Phosphotransferase) domain 1 805 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1079 Mtr-Chr3 18373156 18378188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1079 64 1001 Receptor kinase-like Gene Family AT5G65700 56.489 0.0 1056
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr3g1079 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1079 - - gmx:100815103 1479.92