Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1069 ATGGAAGGAGTAGAAACAGGGTCACATGAAAGGAATGAACTTGTTCGAGCTAGACATGATGTTTCTGAAACTGGGTCTAAACCCTTAAAGAATTTGAATGGTCAAATCTGTCAAATATGCGGTGATACTGTTGGATTAACAGCCACCGGCGAAGTCTTTGTTGCTTGTCACGAGTGTTCCTTCCCACTTTGTTATCCTTGTTATGAATACGAATGGAAAAATGTGATCCAATCATGTCCACAATGCAAGACTAGATTCAAAAGTCACAAAGATGATCCTCGAGTGAAAGGAGGTGATGATGAAGATGATGTCGACGATTTAAGGAATGAGGTCAAGTATGGTCAAGGAAATAATGCTAAGGCAGGATGGCAATGGGATGAAGATGCTGACCTCTCTTCATCTTCTGGACATGATTCTCAATTACAAAATCCCCATCTCACAAATGGACAACTGATGTCTGGCGACATTCCATGTGCTACTTCTGATACTCAATCTGTGCAAACTACATCAGGTCCTTTGGGTCAATCCGAAAATGTTCACTCACGTGCCTATGTTGATCCAAAGCAACCAGGTCTTGAGAGTGACGAGGAGATCAGAAGAGTGCCAGATATGGGAGGTGAATCTGCCGGAACATCAGCCTCTCGTAAAGGCACTGGTTCAACTGCTGGTCCTGAACGTGTTCAGGGGGCTGGAGAGGGTCAAAAGAAGAGAGGTAGAAGCCCAGCCGACAAAGAAAGCAAACGGCTAAAGAGGCTACTGAGGAACAGAGTTTCAGCTCAGCAAGCAAGGGAGAGGAAAAAGGCATACTTGAGTGACTTGGAAACAAGAGTCAATGACTTAGAGAAGAAGAATTCAGAGCTTAAAGAAAAACTTTCAACTTTGCAGAATGAAAATCAAATGCTGAGACAAATATTGAAGAACACAACAGCAAGCAGGAGAGGAAGCAATGGTGGTTCCAACACTGCTGAATGA 972 0.4342 MEGVETGSHERNELVRARHDVSETGSKPLKNLNGQICQICGDTVGLTATGEVFVACHECSFPLCYPCYEYEWKNVIQSCPQCKTRFKSHKDDPRVKGGDDEDDVDDLRNEVKYGQGNNAKAGWQWDEDADLSSSSGHDSQLQNPHLTNGQLMSGDIPCATSDTQSVQTTSGPLGQSENVHSRAYVDPKQPGLESDEEIRRVPDMGGESAGTSASRKGTGSTAGPERVQGAGEGQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLSDLETRVNDLEKKNSELKEKLSTLQNENQMLRQILKNTTASRRGSNGGSNTAE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1069 323 SUPERFAMILY Leucine zipper domain 247 305 IPR046347 GO:0003700|GO:0006355
Mtr3g1069 323 SMART brlzneu 243 307 IPR004827 GO:0003700|GO:0006355
Mtr3g1069 323 MobiDBLite consensus disorder prediction 1 25 - -
Mtr3g1069 323 Gene3D Single helix bin 266 307 - -
Mtr3g1069 323 MobiDBLite consensus disorder prediction 230 266 - -
Mtr3g1069 323 SUPERFAMILY RING/U-box 23 106 - -
Mtr3g1069 323 Pfam bZIP transcription factor 244 305 IPR004827 GO:0003700|GO:0006355
Mtr3g1069 323 CDD bZIP_HY5-like 248 299 - -
Mtr3g1069 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Mtr3g1069 323 MobiDBLite consensus disorder prediction 86 266 - -
Mtr3g1069 323 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 155 313 - -
Mtr3g1069 323 Coils Coil 242 311 - -
Mtr3g1069 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 308 IPR004827 GO:0003700|GO:0006355
Mtr3g1069 323 MobiDBLite consensus disorder prediction 128 177 - -
Mtr3g1069 323 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Mtr3g1069 323 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Mtr3g1069 323 MobiDBLite consensus disorder prediction 86 110 - -
Mtr3g1069 323 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 155 313 IPR044280 GO:0000981|GO:0045944
Mtr3g1069 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Mtr3g1069 323 MobiDBLite consensus disorder prediction 189 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1069 Mtr-Chr3 18095517 18099847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1069 3 190 Glycosyltransferase AT4G32410 59.788 1.56e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g1069 zf-UDP 6.9e-37 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1069 K10999 - aprc:113855639 522.702