Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1065 ATGATATCTCAGACTCATTCATGTGTTGTGATTGCAACAATAATATTTTTTGTTACTGTAGGAGTAAATTCCATTTCAGAAGTTGATAAGATAAGTAGTTTACCTCAGCAGCCAAAAGTAGGATTTCAACAATATGCTGGTTACATTACAGTTGATGAAGTGCAGAAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGTTGAACCAGCTTCCAAGCCAGTAGTGCTTTGGTTAAATGGAGGGCCTGGTTGTTCTTCGGTTGGAGCTGGAGCTTTTGTGGAGCATGGTCCATTCAAACCAACTAAAAATGGTCTTATTAAAAATGATTACAGTTGGAACAAAGAGGCAAATATGCTATACTTGGAATCGCCTGCTGGTGTTGGTTTCTCCTATTCTACAAATGAATCATTCTACGACTCCGTGAACGATTATTTGACAGCAAGGGATAATCTTATTTTTCTACAACATTGGTTCACTAAATTCTCAGAATACAAAAACAACGAGTTCTTTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAAAGCAAATTCAATCTCAAGGGAATTGCAATAGGGAATCCTCTTCTGGAATTCAACACAGATTTCAACTCTAGAGCTGAGTATCTTTGGTCTCATGGACTGATATCAGATTCAACCTATGATTCCTTCACAAAAATATGCAACTTTTCACAAATTAGAAGACAATATGCAAACGGCGCACTTACTACCGTTTGTGCAAGAGTTAATAGGCTAGTGTCAATGGAGGTTAGTAGATATATTGATTCATATGATGTTACTCTTGATGTGTGTCTATCAACAGTAGAACAACAAACATATGTGCTTACTCAATTGCAAGAGGGAGAGAAGATAGATGTTTGTGTGGAAGATGAAACATTCACATACTTGAATAGGAAAGAAGTGCAAGAAGCTCTTCATGCTAAGCTTGTAGGGATCACCACATGGACCACTTGTAGTGGAGTTCTCAAATATAACATGCAAAATTTAGAGATTCCAACCATAAATATTCTGGGAACACTTGTTAAGTCAGGTGTAAGAGTTCTTGTATACAGTGGAGATCAAGATTCAGTATTACCGTTGATTGGTACACGGTCTTTAGTAAATGGATTAGCCAAAGACATCGGTTTGAACACAACAGAGTCCTATAGAACTTGGTTTAATGGAAGACAGGTAGCTGGATGGACACAAGTATATGGTGACATGTTATCCTTTGCAACCATAAGAGGAGCATCTCATGAGGCTCCATTTTCACAACCAGGGAGATCTTTGGTGCTGCTAAAGGCATTTTTGGAAGGAAAATCACTTCCAACTATTCTTTGA 1374 0.3799 MISQTHSCVVIATIIFFVTVGVNSISEVDKISSLPQQPKVGFQQYAGYITVDEVQKRALFYYFVEAEVEPASKPVVLWLNGGPGCSSVGAGAFVEHGPFKPTKNGLIKNDYSWNKEANMLYLESPAGVGFSYSTNESFYDSVNDYLTARDNLIFLQHWFTKFSEYKNNEFFITGESYAGHYVPQLAQLIVQTKSKFNLKGIAIGNPLLEFNTDFNSRAEYLWSHGLISDSTYDSFTKICNFSQIRRQYANGALTTVCARVNRLVSMEVSRYIDSYDVTLDVCLSTVEQQTYVLTQLQEGEKIDVCVEDETFTYLNRKEVQEALHAKLVGITTWTTCSGVLKYNMQNLEIPTINILGTLVKSGVRVLVYSGDQDSVLPLIGTRSLVNGLAKDIGLNTTESYRTWFNGRQVAGWTQVYGDMLSFATIRGASHEAPFSQPGRSLVLLKAFLEGKSLPTIL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1065 457 Pfam Serine carboxypeptidase 38 450 IPR001563 GO:0004185|GO:0006508
Mtr3g1065 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Mtr3g1065 457 Gene3D alpha/beta hydrolase 26 283 IPR029058 -
Mtr3g1065 457 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Mtr3g1065 457 Gene3D - 351 450 - -
Mtr3g1065 457 Gene3D - 305 340 - -
Mtr3g1065 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Mtr3g1065 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Mtr3g1065 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Mtr3g1065 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Mtr3g1065 457 PANTHER CARBOXYPEPTIDASE 8 455 - -
Mtr3g1065 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 455 IPR001563 GO:0004185|GO:0006508
Mtr3g1065 457 SUPERFAMILY alpha/beta-Hydrolases 35 453 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1065 Mtr-Chr3 17935005 17942759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1065 313 453 Calmodulin-binding Proteins AT2G22960 26.950 5.15e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1065 K16297 - gmx:100805028 758.059