Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1043 ATGTCTTCTTCACTCGTCAAGATCCAAGACGATCTTCACCGTCTTTCAATCAAAGATCTGATTGAAAATAGGAGTGAAGAAGAGGAGAATCATCATGTTGGATTTGGAAAACATGGTGGAACGTGCGCAATTTGTTTAGATAATATAGTGTTGCAAGAAACTGCTCTTGTTAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATCCTTCATTGGGCCACATACAGTCAGAAAGTTACCTGCCCTCAGTGCAAACATCCATTTGAGTTCCTAACTGTTCATCGCACACTTGATGGAAGTATTCGAGATTACATGTTTGAGGAAAGTGTTTGCCTACTACTTCGGGCTCAATGGTTCAAGCCTTTAACTGTCGAAGAGCGTGTGGTTGAAGAAGATATCTATGAAGAATTAGTTGACTACTATTATCAGTTTGAAAATGACGATGATCTAGATGATGAGGATTATTATGGTGGTTCAGCTAGTGTACGGATTGGCAACCGTAGATGGGGAGACAACGGTTTTGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCGACCAAGCTTCCAGGATTCGGGAGCAAGCTCAAGTTCATCGCGTGAGCCAAAAAAGAAAGAGGATTCAAAAGTTATGACAGGGAGACGGGCAAAGAGGGCGCTGAAAAGAGAAGCTGCTGATAAGGCAGCTGAAGCAAAGCATCAGCAGCATTTGGCTAGGTTTGGTAGAAAGTGA 735 0.4367 MSSSLVKIQDDLHRLSIKDLIENRSEEEENHHVGFGKHGGTCAICLDNIVLQETALVKGCEHAYCVTCILHWATYSQKVTCPQCKHPFEFLTVHRTLDGSIRDYMFEESVCLLLRAQWFKPLTVEERVVEEDIYEELVDYYYQFENDDDLDDEDYYGGSASVRIGNRRWGDNGFVRAGRQEARPVHRPSFQDSGASSSSSREPKKKEDSKVMTGRRAKRALKREAADKAAEAKHQQHLARFGRK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1043 244 MobiDBLite consensus disorder prediction 199 237 - -
Mtr3g1043 244 SUPERFAMILY RING/U-box 41 92 - -
Mtr3g1043 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 156 IPR013083 -
Mtr3g1043 244 SMART ring_2 42 84 IPR001841 -
Mtr3g1043 244 MobiDBLite consensus disorder prediction 180 244 - -
Mtr3g1043 244 ProSiteProfiles Zinc finger RING-type profile. 42 85 IPR001841 -
Mtr3g1043 244 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 244 - -
Mtr3g1043 244 ProSitePatterns Zinc finger RING-type signature. 60 69 IPR017907 -
Mtr3g1043 244 Pfam Ring finger domain 41 85 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1043 7 244 C3H Transcription Factor Family AT5G19430 57.724 4.48e-82 244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1043 3 17333370 17336640 Mtr3g1043 3 17333370 17336640 ECH