Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1026 ATGGTGATCACCCTATACCAAACGTTCCTTTACAAGGAACTTTCCATTTCCCTTTTCATTTTCTTGATAACCCATTTATTCTTCAGAACTTTTCTCCTCAAAATCAATCACAAAAAACTTCCACCAGGGCCAAAGGGTTATCCAATTGTAGGTGCACTCCCACTAATGGGAACCATGCCTCATCTCACACTCTTCAAAATGTCACAAAAATATGGACCCGTAATGTACCTAAAAATGGGATCACACAACATGGTTGTAGCCTCAACGCCTTCTTCAGCCAAAGCATTTCTTAAAACACTTGACCTAAATTTTTCAAATAGGCCGCCGAACGCTGGCGCAACACACCTAGCTTATGATTCACAAGACATGGTTTTCGCGGACTATGGATCTAGGTGGAAATTACTTAGAAAACTAAGTAACTTACACATGCTCGGTGGAAAGGCTCTTGAAGATTGGTCGAAAATTCGAGGGGACGAAATGGGACACATGATTCGTACAATGTATGATTGTAGCAAGAAAGATGAATCCATTGTTGTGTCTGAGATGTTAACGTATGCTATGGCGAATATGATAGGTCAAGTTATATTAAGTCGTCGTGTGTTCGAGACAAAAGGTTATGAATCGAATGAATTTAAGGATATGGTTGTTGAGCTCATGACCACTGCTGGTTATTTTAATATTGGTGATTTTATACCAATTCTTGCTTGGTTGGATCTTCAAGGCATTGAACGAGGGATGAAGAGCTTACACAAAAAATTTGATGCTTTGTTGACAAAGATGATTGAGGAGCATGTGGCTTCTAGTCTAAAAAGTCATCGGGTTAAACCTGATTTCTTAGACAGACTCATTGCTCAAAGTAAGGAAGATTCTGATGGGGAGAAATTATCACTCACTAACATCAAGGCATTACTCTTGAATCTATTTACTGCAGGAACCGATACATCATCAAGTATCATAGAATGGGCCCTAGCAGAAATGTTGAAGAATCCCAAAATCATGAAAAAAGTTCATGAAGAAATGGACCAAGTCATAGGTAAACAACGACGGTTCCAAGAAGCAGACATTCAAAAGCTTCCTTATTTACAAGCAATTTGCAAAGAGACATATAGAAAACACCCATCAACACCACTAAACTTGCCACGTGTTTCATTAGAACCATGCCAAGTAAATGGCTATTACATCCCAAAAAACACTAGGTTAAGTGTGAACATTTGGGCTATAGGAAGAGACCCTAATGTGTGGGAGAATCCATTGGAGTTTAATCCAGAAAGGTTTTTAACTGGTAAAAATGCTAAAATTGATCCACGTGGAAATGATTTTGAGTTGATTCCTTTTGGTGCTGGGAGAAGAATTTGTGCTGGAACAAGAATGGGGATTGTGCTTGTTCAATACATTTTGGGCACTTTGGTTCATTCATTTGATTGGAAGTTACCAAATGGTGTTGTGGATTTGAACATGGATGAATCATTTGGACTTGCTTTGCAGAAAAAAGTTCCTCTTGCTGCTATTGTTAGCCCAAGATTGTCTCCATCTGCTTACATTCTTTAA 1548 0.387 MVITLYQTFLYKELSISLFIFLITHLFFRTFLLKINHKKLPPGPKGYPIVGALPLMGTMPHLTLFKMSQKYGPVMYLKMGSHNMVVASTPSSAKAFLKTLDLNFSNRPPNAGATHLAYDSQDMVFADYGSRWKLLRKLSNLHMLGGKALEDWSKIRGDEMGHMIRTMYDCSKKDESIVVSEMLTYAMANMIGQVILSRRVFETKGYESNEFKDMVVELMTTAGYFNIGDFIPILAWLDLQGIERGMKSLHKKFDALLTKMIEEHVASSLKSHRVKPDFLDRLIAQSKEDSDGEKLSLTNIKALLLNLFTAGTDTSSSIIEWALAEMLKNPKIMKKVHEEMDQVIGKQRRFQEADIQKLPYLQAICKETYRKHPSTPLNLPRVSLEPCQVNGYYIPKNTRLSVNIWAIGRDPNVWENPLEFNPERFLTGKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFDWKLPNGVVDLNMDESFGLALQKKVPLAAIVSPRLSPSAYIL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1026 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Mtr3g1026 515 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PANTHER CYTOCHROME P450 71B11-RELATED 11 506 - -
Mtr3g1026 515 PANTHER FLAVONOID 3'-MONOOXYGENASE 11 506 - -
Mtr3g1026 515 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 Gene3D Cytochrome P450 33 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1026 515 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1026 Mtr-Chr3 16657211 16661044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1026 15 515 Cytochrome P450 AT5G07990 48.438 7.63e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1026 K13083 - gmx:547705 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1026 3 16657211 16661044 Mtr3g1026 3 16657211 16661044 ECH