Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0983 ATGACAATGGCGGGTCCAGGGCAATTGAACGTGATTGAATCACCTTCGCGTGGATCTCGTAGCGTCGATTGCTTTGAGAAATTGGAGCAAATCGGCGAAGGCACTTATGGTATGGTTTATATGGCTCGAGAGATCGAAACTGGTGAAATTGTTGCTCTCAAGAAAATACGTATGGATAATGAAAGAGAAGGGTTTCCTATTACTGCTATACGCGAAATCAAAATTCTAAAGAAACTACATCATGAAAATGTTATCAAGTTGAAGGAAATCGTTACGTCTCCAGGCCCCGAGAAAGATGACCAAGGAAGGCCAGATGGAAACAAATACAAAGGGGGCATATATATGGTCTTCGAATATATGGACCATGATTTAACAGGTCTTGCGGACCGGCCTGGCATGAGATTTACTGTCCCCCAGATTAAGTGTTACATGAGGCAGCTTTTGACGGGACTTCACTATTGTCATGTCAATCAAGTGCTTCATCGTGATATCAAAGGCTCAAATCTTCTCATAGATAACGAAGGTAATCTGAAGCTGGCAGATTTTGGATTGGCAAGGTCATTTTCAAATGAGCATAATGCAAACCTTACAAATCGAGTCATCACTTTATGGTACAGACCCCCTGAGTTACTATTGGGGACAACAAGGTACGGGCCAGCTGTTGATATGTGGTCTGTTGGGTGCATTTTCGCTGAGCTTCTGCACGGGAAGCCCATCTTTCCTGGAAAAGATGAGCCAGAGCAATTGAACAAGATTTTTGAGTTGTGTGGAGCACCGGATGAGGTGAACTGGCCTGGAGTTACCAAGACTCCTTGGTACAATCAGTTTAAGCCATCAAGACCGATGAAAAGGCGTCTGAGGGAAGTTTTCAGACATTTTGATCGCCATGCATTGGAATTGTTGGAGAAGATGCTCACACTTGATCCAGCTCAGAGAATTCCTGCCAAAGACGCACTTGATGCTGAGTACTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACCAAGAAAAAGCGTCAGCAGCAACGGCAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCACAGCAGCATACCCGTCTTCCTCCGATTCAGCAGGGTGGACATGCCCAAATGCGGCAAGGTCCTAACCACCTTATTCATGGCTCTCAACCAGCAGGTGCTGCAGGACCTAGCCATCATTATGGGAAGCCTCGAGGTCCCTCAGGTGGTCCAGGAAGGTATCCTCCGGGTGGGAACCCTAGTGGGGGATACAATCATCCAAATCGTGGGGGTCAAGGAGGGGGTGCCGGTTATGGCAGTGGACCATATCCTCCTCAAGGGCGGGGGGCACCTTATGGGTCTAGTGGTATGCCTGCAGGAACTGGTGGTGGTCCTCGTGGTGGAGGTGGCTTTGGAGCTCCAAATTATCCTCAAGGTGGTCCTCCATATGGTGGATCGGCTGCTGGTCGTGGGAATCGCAACCAACAGTATGGTTGGCAGCAGTAG 1530 0.4765 MTMAGPGQLNVIESPSRGSRSVDCFEKLEQIGEGTYGMVYMAREIETGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVTKTPWYNQFKPSRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRIPAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHTRLPPIQQGGHAQMRQGPNHLIHGSQPAGAAGPSHHYGKPRGPSGGPGRYPPGGNPSGGYNHPNRGGQGGGAGYGSGPYPPQGRGAPYGSSGMPAGTGGGPRGGGGFGAPNYPQGGPPYGGSAAGRGNRNQQYGWQQ* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0983 509 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Mtr3g0983 509 PANTHER CELL DIVISION PROTEIN KINASE 5 451 - -
Mtr3g0983 509 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 451 - -
Mtr3g0983 509 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0983 509 MobiDBLite consensus disorder prediction 335 509 - -
Mtr3g0983 509 CDD STKc_CDK9_like 25 324 - -
Mtr3g0983 509 MobiDBLite consensus disorder prediction 337 366 - -
Mtr3g0983 509 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Mtr3g0983 509 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0983 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Mtr3g0983 509 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0983 509 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Mtr3g0983 509 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0983 Mtr-Chr3 15620044 15624726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0983 1 509 Core Cell Cycle Gene Families AT5G10270 76.834 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr3g0983 Pkinase 9.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0983 K08819 - gmx:100793565 871.692