Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0971 ATGAATAAGAAGAAGAAGAAGAAGAAACATATTTGTGATATGAAAGACTTAAGTGGTACAAGCAAATCTACCCTTCTCCTAATAATCGCGGGCCGAGTAAAAGACAAAGATTTCAATCCAAAAACTATCTCAATCAATGATCACCCTATGAGTACTCCATCTCAATTAAGAACAATATGTGGCTTTGTTTCACAAGAAGATAACTTGCTTCGATTTCTAACAGTGAAAGAAACTTTGCTATTTAGTGCAAAGTTTAGGCTAAAAGAAATGACACCAAAAGAAAGAGAATTAAGAGTAGAAAACTTAATGCAAGAGTTAGGACTTTTTCATGTAGCACATAGTTTTGTTGGTGATGAAGAAAATAGAGGTGTTTCTGGTGGTGAAAGAAAAAGGGTATCAATTGTTGTTGATATGATTCACAATCCACCAATTTTAGTCTTGGATGAACCAACATTAGGACTTGATAGTACCTCAGCTCTTCATGTTATTGAGCTTCTTTCTTCAATGGCTAAATCAAAGCAAAGGATAGTTATACTTTCAATTCATCAACCTAGCTATAGAATATTGCAATATATTTCCAAGTTCTTGATCCTTTCTCATGGTTCACTAGTTCATAATGGTAGTTTGGAATCACTAGAGGAAAGAATATCCAATTTGGGATTTCAAATTCCAATGCAACTTAATGCCCTTGAATTTTCAATGGAAATTATACAAAGTTTAGAAGATAGTACTAGTAGTTCCATCGTCGACAAAAACGAAACTTCTTTTCCAAGTTCCATGTGA 783 0.3359 MNKKKKKKKHICDMKDLSGTSKSTLLLIIAGRVKDKDFNPKTISINDHPMSTPSQLRTICGFVSQEDNLLRFLTVKETLLFSAKFRLKEMTPKERELRVENLMQELGLFHVAHSFVGDEENRGVSGGERKRVSIVVDMIHNPPILVLDEPTLGLDSTSALHVIELLSSMAKSKQRIVILSIHQPSYRILQYISKFLILSHGSLVHNGSLESLEERISNLGFQIPMQLNALEFSMEIIQSLEDSTSSSIVDKNETSFPSSM* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0971 260 Gene3D - 17 239 IPR027417 -
Mtr3g0971 260 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 8 248 - -
Mtr3g0971 260 ProSitePatterns ABC transporters family signature. 124 138 IPR017871 GO:0005524
Mtr3g0971 260 Pfam ABC transporter 18 151 IPR003439 GO:0005524
Mtr3g0971 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 219 IPR027417 -
Mtr3g0971 260 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 225 IPR003439 GO:0005524
Mtr3g0971 260 Pfam ABC-2 type transporter 182 252 IPR043926 GO:0140359
Mtr3g0971 260 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0971 Mtr-Chr3 15309017 15309799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0971 18 254 Calmodulin-binding Proteins AT2G36910 27.344 2.80e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0971 K05681 - mtr:MTR_3g040670 494.967