Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0959 ATGGCAATTCTTCCTACCATCCTTGTTATTACTAAGTTGCTATTATTCTTCTCCAAATTTTCATTTGCAACCGATACAATTACACAATCACTTCCTGATGGAAGCACCTTGGTTTCTAAGGGTGGAGTATTTGAGTTAGGTTTCTTCAATCCAGGTAGTTCCACGAACCGCTATGTTGGAATTTGGTACAAAAATATCCCGGTTAGAAGAGTTGTTTGGGTTGCCAATCGTGACAATCCAATCAAAGACACTTCTAGCAAGTTGATCATAAGTCAAGATAGAAATCTTGTACTTCTCGATAAAAATCAATCCCTACTATGGTCAACAAACGCGACAATAGAAAAGGTTTCAAGTCCTATTGCGCAACTCTTGGACGATGGAAATTTAGTACTGAAAAATGGTGGTGAAGAACATTTTTTGTGGCAAAGTTTTGATTATCCTTGTGATACAATATTATCAGGAATGAAGGCTGGATGGGACAAAAGAAAGGATCTTAATAGGAGTCTCGTTGCGTGGAAAAATTGGGATGATCCATCTTCGAGTGACTTTACTTCAGCTATGGTACTGACTCCTAATCCTGAAAGCTTTATTTGGAAAGGCTTAACAAAACTCTACAGAACAGGACCATGGACTGGTCCTCGATCTAGCGGAGTAATTGGATTAACCGAAAACCCACTATATGATTATGAGTTTGTCAACAATCAAGATGAGGTATATTATTTGTTTACACTCAAGAATAGTTCTGTGGTTTCTTTTGTTGTTTTGAACCGAACACTTTCTGTTCGTCTACGCCTCATTTGGATTTCAGAATCCAAAACATGGAATGTTTACCAAACTTTACCACAAGATAGTTGTGATGTGTATAATGTTTGTAGGGAAAATGGGCTATGCATGATTAATGCATCGCCCATGTGTCGGTGTTTAGATGGGTTTATACCGAAATCGCCACAACAGTGGAGTGCAATGGACTGGACACAAGGATGTGTGCGTAATAGTAATTGGAGTTGTGGGATCAAAGACAGAGACGGGTTTAAGAAAATTACTGGAATGAAATTACCAGATACTATGCATTCTTGGATTGATGAGAAAATGACACTTGATGATTGCAAGACTAAATGTTTGAAAAATTGTTCTTGCACTGCTTACTCAAGTTTAGACACAAGTGGAGCAGGTAGCGGTTGTTCTATCTGGTTTGGTGATCTTGTCGATCTGAGGGTTTCACAAAGTGGACAAGATCTATATGTCCGAACGGACGTATCAGACATCGGTGATAAAAATGCGAATACTAAAACCATTGTATTGGCGGTATCAATCACATCTTCACTAGTCCTTTTGATATTATTGGCAGTAACCTACATTTATATAACAAAGACAAAGTATAAAGAGGGAATAGAGAAAACTACAAGTTCAGAAGAGAAATATGAGGACTCACATGAAGATTTTGAGCTTCCTATCTTCGATCAAGATACAATACTCAACGCAACAAAAAACTTCTCTTTTGATAACAAGCTCGGTGAAGGTGGTTTTGGACCGGTATACAAGGGTACATTGCTTGATGGACAAGAAATTGCTGTCAAAAGGCTTTCAAGGAGTTCTGGACAAGGACTTAAAGAGTTTAAGAATGAAGTTATATTATGTACTAAACTTCAACACCGAAATCTTGTTAAGGTTGTTGGTTGTTGTATTGAAGGAGATGAGAAAATGTTGATTTATGAATACATGTCCAACAAAAGTCTCGATACATTTCTTTTTGATCCATTTCAAAGTAAATTGTTGGATTGGTCTGCACGCTTTAACATTCTATTTGGAATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCAAGATTACGAATCATACACAGAGATCTGAAAGTGAGTAATATTTTATTGGACGATGATATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAAATTGAGGGGAGAACAAACAGAATCGTTGGCACATACGGCTATATGGCACCTGAATATGCCACTGATGGATTATTTTCTATCAAATCAGATGTATTTAGCTTTGGCGTATTATTATTAGAAATTATCAGTGGAAAGAAAAATAGAGCACTTAGCTACCATGAAGAAGATCATAATCTTATTGGATATGCATGGAGATTGTGGAAAGAGGGCATTCCACTCAAATTGATCGATGACTATTTAAGGCATTCATGTATTGAATCTGAAGCATTACGTTGCATTCAAATTGGTCTACTATGCCTACAAAATCATGCTGATGATAGACCAAACATGACATCAGTGGTTGTGATGTTGAGTAGCGAAAATGGTTTACCTAAACCAAAGGAACCAGGTTTATTAATTAAAAAGCTCTCAACTGAAGGAGAAGCTTCTTCTGGAAGACAAACATCTTCTTCAACAAATGAAGTAACTATCTCATTATTAGATGCTAGATAG 2448 0.3705 MAILPTILVITKLLLFFSKFSFATDTITQSLPDGSTLVSKGGVFELGFFNPGSSTNRYVGIWYKNIPVRRVVWVANRDNPIKDTSSKLIISQDRNLVLLDKNQSLLWSTNATIEKVSSPIAQLLDDGNLVLKNGGEEHFLWQSFDYPCDTILSGMKAGWDKRKDLNRSLVAWKNWDDPSSSDFTSAMVLTPNPESFIWKGLTKLYRTGPWTGPRSSGVIGLTENPLYDYEFVNNQDEVYYLFTLKNSSVVSFVVLNRTLSVRLRLIWISESKTWNVYQTLPQDSCDVYNVCRENGLCMINASPMCRCLDGFIPKSPQQWSAMDWTQGCVRNSNWSCGIKDRDGFKKITGMKLPDTMHSWIDEKMTLDDCKTKCLKNCSCTAYSSLDTSGAGSGCSIWFGDLVDLRVSQSGQDLYVRTDVSDIGDKNANTKTIVLAVSITSSLVLLILLAVTYIYITKTKYKEGIEKTTSSEEKYEDSHEDFELPIFDQDTILNATKNFSFDNKLGEGGFGPVYKGTLLDGQEIAVKRLSRSSGQGLKEFKNEVILCTKLQHRNLVKVVGCCIEGDEKMLIYEYMSNKSLDTFLFDPFQSKLLDWSARFNILFGIARGLLYLHQDSRLRIIHRDLKVSNILLDDDMNPKISDFGMARMCGGDQIEGRTNRIVGTYGYMAPEYATDGLFSIKSDVFSFGVLLLEIISGKKNRALSYHEEDHNLIGYAWRLWKEGIPLKLIDDYLRHSCIESEALRCIQIGLLCLQNHADDRPNMTSVVVMLSSENGLPKPKEPGLLIKKLSTEGEASSGRQTSSSTNEVTISLLDAR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0959 815 SMART ntp_6 339 417 IPR003609 -
Mtr3g0959 815 Pfam PAN-like domain 338 404 IPR003609 -
Mtr3g0959 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 178 IPR036426 -
Mtr3g0959 815 CDD B_lectin 28 147 IPR001480 -
Mtr3g0959 815 Gene3D Hepatocyte Growth Factor 335 417 - -
Mtr3g0959 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Mtr3g0959 815 Gene3D Transferase(Phosphotransferase) domain 1 574 777 - -
Mtr3g0959 815 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Mtr3g0959 815 Gene3D Phosphorylase Kinase; domain 1 471 573 - -
Mtr3g0959 815 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Mtr3g0959 815 MobiDBLite consensus disorder prediction 790 815 - -
Mtr3g0959 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Mtr3g0959 815 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Mtr3g0959 815 CDD PAN_AP_plant 335 417 - -
Mtr3g0959 815 Pfam D-mannose binding lectin 71 173 IPR001480 -
Mtr3g0959 815 Pfam Domain of unknown function (DUF3403) 772 815 IPR021820 GO:0004674
Mtr3g0959 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 30 809 - -
Mtr3g0959 815 MobiDBLite consensus disorder prediction 792 815 - -
Mtr3g0959 815 SUPERFAMILY Protein kinase-like (PK-like) 480 773 IPR011009 -
Mtr3g0959 815 CDD STKc_IRAK 504 769 - -
Mtr3g0959 815 SMART blect_4 28 147 IPR001480 -
Mtr3g0959 815 Pfam S-locus glycoprotein domain 205 315 IPR000858 GO:0048544
Mtr3g0959 815 Gene3D - 23 144 IPR036426 -
Mtr3g0959 815 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 30 809 - -
Mtr3g0959 815 SMART serkin_6 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0959 815 ProSiteProfiles Protein kinase domain profile. 498 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0959 815 Pfam Protein tyrosine and serine/threonine kinase 499 767 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0959 Mtr-Chr3 15043512 15046800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0959 424 795 Receptor kinase-like Gene Family AT4G23190 49.737 5.18e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0959 PK_Tyr_Ser-Thr 9.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0959 - - gmx:100790436 1161.75