Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0952 ATGAATCTGAGAGTTAGTTTTCAAAAGTTGAAGAAGTGTGTTGGAAGAAAGCAAGGCATGAGAAATACAAACAGAGCCAACGAACCTGCCAGCTTCTGGACTCAAGCAAACGCGCTTCTTAGAAAGAACTTAACCTTCCAGAAACGAAATGTGAAGACAAACATAAGGCTGATCTTGTTCCCATTTGTGCTGTGTATATTGCTGGTTCTAATTCAAACTATTCTCAATAATCAATTTGATAAGGCCAAATATAAGTGTGGATGCGTGGAGAATGAATGTGGGGTTCAATATTCGGATTTTGACCAAGTTGGCACTTGTCCTATTACTAACCCTATGGAATGGCCTCCTTTATTGCAAACACCTGATCCACGATACCGCGCTGTTAGAACGGATTTCCTTCCGTTTTCTGATTTTCCAAACCCCTTATGCAGAAACAATGGCTCATGTCCCCTCACGATGCTCTTCACAGGCACTAATCAGTCTTTCGGAGAAGTCTTGTCGAGGAATATGATCCCAAGTACCATTGATATAGATAATTCAAATGTTATGGATAGTTTCGCGACAAATGTCTTGGGATCGTCAACAGAGACAGAGTACACCAATTTTCTAGAGCCTGCTTTCTTTTCAGAGCTTCCCATTTACTATCTACAAAGTCAGTGCGGAAAGAACTCTACATTGTCCGTTCCTGTACAGATATCGACCAGTAGCATTCAGCAAGAGTTGAGATGTGCTCAGGCTTTACGGTTATGGCGTAATAGTTCTTCTGAGGTAAACAATGCTATATATAAAGGTTATAGAAAAGGTAACACAGAGAGACAGATCAATGAGATAACTGCAGGTTATGATTTTCTAAATTCAAATGAGGATACATTTAATGTCAGTATATGGTACAACTCAACCTATAAAAATGACACCGGCTTTGATAAAATTGCATTGGCACGGATTCCTCGTTCTGTAAATTTGGTATCAAATTCCTACCTTCAGTTTCTGTTGGGATCTGGTACCAAAATGTTGTTTGAGTTTGTAAAGGAAATGCCAAAACCCGAGACCCCATTAAAGTTTGACGTGGCTTCTCTTTTAGGCGGTCTCTTCTTTACATGGGTCATCTTGCAACTTTTTCCTGTTGTCCTCACATCATTAGTTTACGAGAAGCAACAAAATTTGAGAATCATGATGAAAATGCATGGTCTCGGTGATGGGCCATATTGGATTATTTCTTACAGTTATTTTCTTGCCATATCAATTATCTACATGTTGTGTTTCGTCATATTTGGCACAGTCATAGGATTAAAATTCTTCACAATGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAACTTACAAATTTCGCTGGCATTTTTATTGGCCTCGCTGTTTTCCAATGTTAAGACGGCTACAGTGATTGCATATATAGGTGTTTTTGGCACCGGTCTATTAGCTGGTTTTCTTTTCCAATTTTTTATTCAAGATACATCGTTTCCAAAAGGGTGGATCATTGTTATGGAGTTATATCCTGGGTTTGCTTTATATCGTGGGTTATATGAATTTTCACAATCGTCTTTTACTGGAGATACTATGGGGACTCATGGTATGCGGTGGGGAGATCTCAATGATAGCACAAATGGCATGAAAGAGGTCTTGATTATAATGTTCGTGGAGTGGCTATTAGTTTTGTTCTTCGCTTATTACATCGATCAAGTTTTATCAACACGAAGTTGGAAAAGTCCTCTTTTGTTCTTGAAAGGATTTCAGAAAAAACATAGTTCATCTTTTCGGAAGCCTAGTCTCCAAAGGCAAGGATCTAAAGTTTTTGTTATGACCGAGAAAGCAGATATTCACCAAGAGAGGGAGAAGGTGGAGCAGCTGCTACTTGAACCTACTACAAATCATGCAATTGTTTGCGACAAACTGAGCAAAGTTTATCCAGGGAGGGATGGTAACCCGAAGAAATTTGCGGTGAGAGAGTTGTCCCTTGCTTTGCCTGAAGGGGAATGCTTTGGAATGCTTGGTCCCAATGGTGCTGGAAAGACTTCTTTTATCAACATGATGATAGGTCTTACAAAGCCAACCTCAGGTACAGCATATGTTCAAGGTCTTGACATACGAACTGATATGAACGGAATATATACTAGCATGGGTGTATGCCCTCAGCACGACTTGCTGTGGGAAATCTTGACAGGAAGAGAGCATCTACTCTTTTACGGCAGACTTAAAAATCTTAAAGGTTCTGCCTTAACACAAGCGGTGGAAGAATCTTTGAAAAGTGTAAACCTTTTTCACGGAGGGGTTGCTGATAAAAAGGCTGGAAAATATAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTAATCGGAGATCCTACGGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCGTCAAGAAAGAACTTATGGAGTGTTGTTAATCGTGCAAAACAAGACCGTGCGATCATTCTCACTACACATTCCATGGAAGAGGCAGAAGTCCTATGCGATCGATTAGGAATATTTGTAGACGGTAGCTTTCAGTGTATAGGAAATCCAAAAGAGCTGAAAGGAAGATATGGAGGAACTTATGTATTCTCAATGGCAACATCTATTGATCATGAATCGAATGTCGAGAAATTGGTGCAACAACTCTCCCCAAATGCTAAGAAGATTTACCATATCTCAGGAACTCAAAAGTTTGAGCTACCAAAAGATGAGGTTAAAATATCTAATGTATTCCAAGCAGTTGAAACTGCAAAGAGAAATTTCCCAGTTTCTGCATGGGGTTTAGCTGACACCACATTGGAAGATGTATTCATTAAGGTTGCACGTGAGGCTCAGCCATTTCATACTTTGTCATAA 2877 0.3949 MNLRVSFQKLKKCVGRKQGMRNTNRANEPASFWTQANALLRKNLTFQKRNVKTNIRLILFPFVLCILLVLIQTILNNQFDKAKYKCGCVENECGVQYSDFDQVGTCPITNPMEWPPLLQTPDPRYRAVRTDFLPFSDFPNPLCRNNGSCPLTMLFTGTNQSFGEVLSRNMIPSTIDIDNSNVMDSFATNVLGSSTETEYTNFLEPAFFSELPIYYLQSQCGKNSTLSVPVQISTSSIQQELRCAQALRLWRNSSSEVNNAIYKGYRKGNTERQINEITAGYDFLNSNEDTFNVSIWYNSTYKNDTGFDKIALARIPRSVNLVSNSYLQFLLGSGTKMLFEFVKEMPKPETPLKFDVASLLGGLFFTWVILQLFPVVLTSLVYEKQQNLRIMMKMHGLGDGPYWIISYSYFLAISIIYMLCFVIFGTVIGLKFFTMNDYSIQFVFYFIYINLQISLAFLLASLFSNVKTATVIAYIGVFGTGLLAGFLFQFFIQDTSFPKGWIIVMELYPGFALYRGLYEFSQSSFTGDTMGTHGMRWGDLNDSTNGMKEVLIIMFVEWLLVLFFAYYIDQVLSTRSWKSPLLFLKGFQKKHSSSFRKPSLQRQGSKVFVMTEKADIHQEREKVEQLLLEPTTNHAIVCDKLSKVYPGRDGNPKKFAVRELSLALPEGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAYVQGLDIRTDMNGIYTSMGVCPQHDLLWEILTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPTVVYMDEPSTGLDPASRKNLWSVVNRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSFQCIGNPKELKGRYGGTYVFSMATSIDHESNVEKLVQQLSPNAKKIYHISGTQKFELPKDEVKISNVFQAVETAKRNFPVSAWGLADTTLEDVFIKVAREAQPFHTLS* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0952 958 Gene3D - 626 902 IPR027417 -
Mtr3g0952 958 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 28 958 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mtr3g0952 958 Pfam ABC transporter 658 802 IPR003439 GO:0005524
Mtr3g0952 958 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 873 IPR003439 GO:0005524
Mtr3g0952 958 Pfam ABC-2 family transporter protein 59 566 - -
Mtr3g0952 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 864 IPR027417 -
Mtr3g0952 958 SMART AAA_5 666 849 IPR003593 -
Mtr3g0952 958 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 28 958 - -
Mtr3g0952 958 CDD ABC_subfamily_A 640 861 - -
Mtr3g0952 958 ProSitePatterns ABC transporters family signature. 775 789 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0952 Mtr-Chr3 14916238 14924385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0952 645 865 Calmodulin-binding Proteins AT2G36910 24.359 7.43e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0952 - - cam:101495128 1694.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0952 3 14916238 14924385 Mtr3g0952 3 14916238 14924385 ECH