Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0951 ATGACAAACGCTTTTACTTTGGTAACACAACAATACAAAGCGTTGCTAAAAAAAAACATATTACTCTCATGGCGAAACAAAAGATCAATTCTTCTTCAACTCATGTCACCAATCTTCTTCATTTTCCTTATCTTCGCCATAGACAAAGCAATAAAAGCACAGTCATCAACAACTTCTGCATTCAAATCAATCACAAACCCTCCATTAATTCCACCTCCATCAATTAAACCTTGTGAGGAGAAATTCTTTGTGCATAAGCCTTGTTATGATTTCATTTGGAGTGGTGATGATGATCCAAAGTTTCATACGATTGTGGAGAGGATTATTAAGAATAATCCTGGTAGAGAAATACCTGTTGAAAAGGTGAAGAGTTTTCGTGATAAGGGTGAAGTTGATGATTGGTTGTTTAAGCATCCTTTGAAATGTCCTGTTGCTGTTCATTTTGGTCAAAAGAATGGTAGTGTTATTAGTTATGGGATTCAGACTAATTCTACTAGTGTTCAGAAACGTGGCCAGTATGAAGATCCTACTTTTGATTTTCAGTTGCCTCTTCAGCTTGCTGCGGAGCGTGAAATCGCTAGGTTTCTTATTGGAGACCCAGGCTTCAAGTGGAATGTGTTTTTCAAGGAATTCCCGCACCCAGGAATTGCTCCTTTCTCTACAGTTGGATCAATGGGTCCAACATTTTTTCTTGCAACTGCTATGTTTAATTTCGTTCTTCAGATGAGTTCATTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCGTGATGGGGCTTTACGACTCTGCATACTGGTTATCATGGCTAACCTGGGAAACAGTTGTTACAATCATATCATCTCTTCTCTTAGTTCTCACTGGCATGGTGTTTCAGTTTGATTTCTTCTTGAAAAACAGTTTCGCTGTTCTGTTCTTTTTGTTCTTCCTATTTGAACTCAGCATGACTGGGTTTGCCTTCTTGTTATCAGCTTTCATTCGTAAATCATCTTCGGCAACAACAGTCGGCTTTTCCGTATTTATTGTCGGCTTCATGACTCAGATGGTGTCAACAGTCGGAGGAGGAGATCTAAAAATTTTCCCTGCTCGTTACCGAAGTTTATGGTTATTGTTTCCGCCTAATCCTTTTGCTCAAGGCTTGAGTGTGCTTGCAACGGCTGTTTCAACTCCTGAAGATAATGGGGTTAGCTGGAATAGACGAGGAAAATGTGCCGTTAACGACGATGACTGTGTGATGACAATGAATGATATTTATATACGGCTTGCAGCCACATTCTTTCTGTGGTTCGTTCTGGCCATCTACTTTGACAATATAATCCCAAATGAAATGGGTGTTAGGAAATCTGTGTTATACTTTCTAAATCCTCGTTATTGGACAGGAGATGGAGGACAAAAAGTGAAAGAGGGTGGGCTTTGTAGTTGCATATCTTCCTCCCGGCATGAAGAGTTTAGTCCACCAGATGATGAAGACGTCCTTGAAGAAGAAAATGTTGTGAAGCAGCAACAAACACAAGGTGTCGTTGATGAAAATGTTGCTGTTCAGGTACAAGGCATTGTGAAGACTTACCCCGGTACATTTAAGTTTGGTTGCTGCTGTAACTGTAAAAGAACTGCTCCTTACCACGCTGTTAAGGGCTTGTGGGTGAACTTTACAAAGAATCAGTTATTTTGTCTTTTGGGACCCAATGGAGCGGGAAAAACTACAGCTATTAGTTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCATTGATTTATGGAAATTCGGTCCGAAGCTCTAGTGGCATGTCAAACATTCGAAAGATTATTGGAGTGTGTCCCCAGTTTGATATCCTATGGGATGCTTTGTCTGGTCAAGAACACCTCGAACTCTTCTCTAGAATTAAAGGGCTGTCCCCAGATTCTATAAAATCAATTACAGAAACATCATTGGCAGAGGTGAGACTCACGGATTCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGTCTCAGTGTTGCAATTGCACTTATCGGTGACCCCAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTCACAACACATTCTATGGAAGAAGCTGACATTCTAAGTGACCGTATAGGAATCATGGCAAAGGGAAAGCTGCGCTGCATTGGAACCTCAATCAGATTGAAGTCACGTTTTGGTACTGGCTTTATTACTAATATTAGCTTCGGAAACAACAATGATCACAGTCCTGCAAATGGTGACACAGTATCAGCAAGACATCACGAGCCTGTGAAGCAATTCTTTAAGAATCATTTGGATGTAGTACCAAAAGAGGAGAACAATAACTTCCTAACTTATGTGATTCCTCATGAAAAAGAGGCACTCCTTACGAATTTCTTTTCAGAGCTCCAAGATAGAAAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAAGCAGAGCTAGAAAGTGCTGCAGCCGAAGGGACCCTAGTGACTTTGACCTTGACATCTGGAGAGTCTGTCCAGATTCCTGTGGGAGCTATGTATGTGGGATTTCCCGGATCAGAGTCTACTGAATACCCCACAGGTTTTATGGTAGAAGTGCATTGGGAGCAAGATGACACCGGTACCCTTTGTGTTGCCGGCCACTCCCAGAAAGCTCCTATTCCTCAAAATATCCAACTACCATCTGCTACTGCAAGACAACGCCGGTCAGGGTCAGTTCATGGAGTTGTGATTGATCCAAATCAAGTTAGTTCAGACAGTTTTCAATGA 2877 0.4126 MTNAFTLVTQQYKALLKKNILLSWRNKRSILLQLMSPIFFIFLIFAIDKAIKAQSSTTSAFKSITNPPLIPPPSIKPCEEKFFVHKPCYDFIWSGDDDPKFHTIVERIIKNNPGREIPVEKVKSFRDKGEVDDWLFKHPLKCPVAVHFGQKNGSVISYGIQTNSTSVQKRGQYEDPTFDFQLPLQLAAEREIARFLIGDPGFKWNVFFKEFPHPGIAPFSTVGSMGPTFFLATAMFNFVLQMSSLVTEKELKLRQAMTVMGLYDSAYWLSWLTWETVVTIISSLLLVLTGMVFQFDFFLKNSFAVLFFLFFLFELSMTGFAFLLSAFIRKSSSATTVGFSVFIVGFMTQMVSTVGGGDLKIFPARYRSLWLLFPPNPFAQGLSVLATAVSTPEDNGVSWNRRGKCAVNDDDCVMTMNDIYIRLAATFFLWFVLAIYFDNIIPNEMGVRKSVLYFLNPRYWTGDGGQKVKEGGLCSCISSSRHEEFSPPDDEDVLEEENVVKQQQTQGVVDENVAVQVQGIVKTYPGTFKFGCCCNCKRTAPYHAVKGLWVNFTKNQLFCLLGPNGAGKTTAISCLTGITPVTDGDALIYGNSVRSSSGMSNIRKIIGVCPQFDILWDALSGQEHLELFSRIKGLSPDSIKSITETSLAEVRLTDSAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFITNISFGNNNDHSPANGDTVSARHHEPVKQFFKNHLDVVPKEENNNFLTYVIPHEKEALLTNFFSELQDRKEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGTLVTLTLTSGESVQIPVGAMYVGFPGSESTEYPTGFMVEVHWEQDDTGTLCVAGHSQKAPIPQNIQLPSATARQRRSGSVHGVVIDPNQVSSDSFQ* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0951 958 SMART AAA_5 554 738 IPR003593 -
Mtr3g0951 958 Pfam ABC transporter 548 690 IPR003439 GO:0005524
Mtr3g0951 958 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 931 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mtr3g0951 958 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 515 761 IPR003439 GO:0005524
Mtr3g0951 958 Pfam ABC-2 family transporter protein 225 436 - -
Mtr3g0951 958 MobiDBLite consensus disorder prediction 938 958 - -
Mtr3g0951 958 CDD ABC_subfamily_A 515 749 - -
Mtr3g0951 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 743 IPR027417 -
Mtr3g0951 958 Gene3D - 501 762 IPR027417 -
Mtr3g0951 958 PANTHER ABC TRANSPORTER A FAMILY MEMBER 1-RELATED 6 931 - -
Mtr3g0951 958 ProSitePatterns ABC transporters family signature. 663 677 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0951 Mtr-Chr3 14860647 14868662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0951 558 779 Calmodulin-binding Proteins AT2G36910 24.681 1.41e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0951 - - gmx:100786538 1465.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0951 3 14860647 14868662 Mtr3g0951 3 14860647 14868662 ECH