Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0942 ATGGATTCTCTCAAAATTTTCAAAGGTTATGACAAAGTAGAAGAAAATCTCGAAGATCCTCAAAAACAACAAAACTACAACAACAATCGTAACAAAATCTCCAAACCCCTCATCGCCACAATCTCCATCATCATAACCATCCTCTTCCTTACCCTCACTTTATCATTCACCCTTTTCTTCCACCACAACACAAACACCGAGTCACAAAAACCCTTCAACTCACCCAACTCAATCCGATCCATTTGCAACATAACTCGCTTCCGTAACTCATGCTTCACCGCTCTATCCTCCTCCTCACAAAACCTCACCAACCCAAAAACAATCCTCAAAATCTCAATCCTCGCCTCCATCAACCAACTCACAGAACTTGCTTCATCGCTCAAAGCAAACTCCAAGGGAAACGCGTTCGGTGATTGCAATGAACAGATCGGGGATGCGGTGAGTCGACTCAACGATTCGATGTCGGTGGTTACTAACGGTGCCGTAACGTTGACAGATGGTGAAGTTAATGATATTCAGACGTGGGTTAGTGCTGCGTTGACGGATCAACAAACGTGTGTTGATGGGTTGGAAGAGGTTGGTGTTTCTTTGGAAAGTGCTGGAAAGGTAAAGAATTTGATGGAAAAGTCTAATGAGTATGTTAGTAATAGTTTGGCTATTGTTGCTAATATACGCCATTTGTTACATTGA 690 0.4246 MDSLKIFKGYDKVEENLEDPQKQQNYNNNRNKISKPLIATISIIITILFLTLTLSFTLFFHHNTNTESQKPFNSPNSIRSICNITRFRNSCFTALSSSSQNLTNPKTILKISILASINQLTELASSLKANSKGNAFGDCNEQIGDAVSRLNDSMSVVTNGAVTLTDGEVNDIQTWVSAALTDQQTCVDGLEEVGVSLESAGKVKNLMEKSNEYVSNSLAIVANIRHLLH* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0942 229 TIGRFAM PME_inhib: pectinesterase inhibitor domain 46 223 IPR006501 GO:0004857
Mtr3g0942 229 Pfam Plant invertase/pectin methylesterase inhibitor 77 220 IPR006501 GO:0004857
Mtr3g0942 229 PANTHER PECTINESTERASE 1-LIKE 3 223 - -
Mtr3g0942 229 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 224 IPR035513 -
Mtr3g0942 229 PANTHER PECTINESTERASE 3 223 - -
Mtr3g0942 229 CDD PMEI-like_3 80 224 - -
Mtr3g0942 229 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 225 IPR035513 -
Mtr3g0942 229 SMART PMEI_2 73 220 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0942 Mtr-Chr3 14188423 14189304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0942 1 224 Carbohydrate Esterase AT1G53840 33.333 1.07e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0942 - - gmx:100789567 184.496