Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0941 ATGTCTCTCTACCAAGCTCCTGGATTCCGATTCCACCCTACTGATGAAGAGATCGTTTGTTTTTATCTGAAGCGGAAACTCACCGGAAAGTTACCACCCTGTTTTGATCATCTTGCTTTCATCGATATCTACAAGTTTGAACCATGGGATCTTCCTAATATGTCCAAGCTGAAAACTAAGGATTTGGAATGGTACTTCTTCAGTGCGCTGGACAAGAAGTATGGCACTGGATGCAGGACGAATCGTGCTACTGATCGAGGTTATTGGAAGACTACTGGAAAGGATCGGGTTATCAAAAACGGGGAGGAGACAGTTGGAATGAAGAAGACCCTTGTTTATCACCTGGGTCGGGCCCCACATGGTAACCGAAGCAATTGGGTCATGCATGAGTATAGGATGATTGATGAAGAATTGGCCAAAACTGGAGGGCAGGATGCTTATGTGCTGTGTAGGATCTTCGAGAAGAGTGGTTCAGGGCCTAAGAATGGGGAGAAGTATGGGGCTCCCTTTGTAGAGGCAGAGTGGCAGAATGTTGATGAACCAGTCAATCCCTTGCCACCGGTTGATAATCAGCTTTTGGAACAAGTGGCTGCTCCTGCTCCTGATTACGCTGAATTTTTGCAATCTTTGGTGGCTTTTGATAACGATCTTTTGAATGAAAGTGTGCCTACTGCTACTGATGATAATTATCTTGAAATCCTTGACCTTGACCAGGAGCTTGATACCAGTGTTACAGTTGGAAATGCTGATTTGCCACCAAACTTCTATTATGGGGAGTGTAGTAGCTTTCCTCAGCATTCCCAATCGGAAGCTGCTTTTGGTATTTATGATCATCAGGTTGGTGGTCTATATGGTGTGGATTCAGTGCAAGATGGTTACAATGGCGAGACAAACCATAACGAAAATCCTCTGAACTTCGATTTTGCCTCTGAGGATCCAGATCTGTATTTTGATGCGGCTGAATATCTTAGGGGTTTGAACGAAGAATATGTTGAAACCAATGATCTTAAGAATCTTGATGGGGTTGATTCCACCGTGATAGATCCTTCTGTTTCTGAATTGCTAGATGAGTACCTTGAATGCCCTGATGAAGAAGATATTACCAAATATATATGCTTTGATTCTGAAAGCCCCATTGCTAATCATGTTTTTGAAGCACAGTATAGTAATGGAGTTTTACCTAAGGAGGATCAAGGAGCTGCATCAAATTGGGTCTCAGGAGGTGAAAATGCTTTTGTAAAGCAAGCCAATAAATTGTTGGCCGGCATACCAGCTCCTCCTGCATTTGCTTCTGAGTTTCCTTCTAAGGAGTTTGCTGTTGGGATGCATTCCGCAGCTGAGTTTTCCAATTCAGCTCATATAACTACCGGTATTATTAGCATTACAGACATTACTTACAGTGGCAATATGATGGATTGGATGGCCGGCAAGAATGGAGGTTTTGACACCATAATGTCTAATGAATTTTCCCAAACTGCTGCTATTAACTCTGCTACTGGCTTGGTCTGTAGGAAAACTGCATGTATGTTATCACATGGTTGGGTTTACTTGATGGGTTTCTCAGTTGTGATTCTTTCAATGAGTTTGAAGATTGGAAGCTTCATGTATATGGGTAAATGA 1620 0.4259 MSLYQAPGFRFHPTDEEIVCFYLKRKLTGKLPPCFDHLAFIDIYKFEPWDLPNMSKLKTKDLEWYFFSALDKKYGTGCRTNRATDRGYWKTTGKDRVIKNGEETVGMKKTLVYHLGRAPHGNRSNWVMHEYRMIDEELAKTGGQDAYVLCRIFEKSGSGPKNGEKYGAPFVEAEWQNVDEPVNPLPPVDNQLLEQVAAPAPDYAEFLQSLVAFDNDLLNESVPTATDDNYLEILDLDQELDTSVTVGNADLPPNFYYGECSSFPQHSQSEAAFGIYDHQVGGLYGVDSVQDGYNGETNHNENPLNFDFASEDPDLYFDAAEYLRGLNEEYVETNDLKNLDGVDSTVIDPSVSELLDEYLECPDEEDITKYICFDSESPIANHVFEAQYSNGVLPKEDQGAASNWVSGGENAFVKQANKLLAGIPAPPAFASEFPSKEFAVGMHSAAEFSNSAHITTGIISITDITYSGNMMDWMAGKNGGFDTIMSNEFSQTAAINSATGLVCRKTACMLSHGWVYLMGFSVVILSMSLKIGSFMYMGK* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0941 539 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Mtr3g0941 539 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 6 177 - -
Mtr3g0941 539 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 411 534 - -
Mtr3g0941 539 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Mtr3g0941 539 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mtr3g0941 539 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 411 534 - -
Mtr3g0941 539 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 177 - -
Mtr3g0941 539 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0941 Mtr-Chr3 14179371 14184155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0941 6 527 NAC Transcription Factor Family AT5G04410 37.326 4.92e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr3g0941 NAM 1.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0941 - - mtr:MTR_0036s0150 1108.59