Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0938 ATGGCTACATGTCTCATATTTACATGGATTCCGTGGACGGATGAAGAGCACAAGTTGTTTTCGGTTGGATTGCAGAAAGTTGATAAAGGTGATTGGAGAGGAATCTCAAGGAACTATGTGAAAACAAGAACGCCTATGCAGGTTGCAAGTCATGCTCAGAAGTACTTTCTCTGCCGAAGTAATCTCAATCGCTGTCGCCGTAGATCCAGTCTCTTTGATATCACCACCGACAGGGGCTACTTTTTATTAGCAATTGTAAGAAATGTTAATGTTAGAACAAATCTGTTTCATTTGAAAAGTTTGTATGGTGCAACCAAAAGCAGAAATGGATCTCCAATTTCAGTCAACAAATATGAGCAATACTTAAGTGCAGTTGCATTTGCTGTTACTACTTTTGGAACGGTTGCTTTGATGAGTGGATTCTTCCTTAAACCTGTTGCTACACTTGATGATTATCTTGCTAACGTTCTGCCTCTATTTGGTGGTTTCTTATCTATTCTTGGAGTTTCTGAGTTGAGACGGCTGGATTAA 531 0.3955 MATCLIFTWIPWTDEEHKLFSVGLQKVDKGDWRGISRNYVKTRTPMQVASHAQKYFLCRSNLNRCRRRSSLFDITTDRGYFLLAIVRNVNVRTNLFHLKSLYGATKSRNGSPISVNKYEQYLSAVAFAVTTFGTVALMSGFFLKPVATLDDYLANVLPLFGGFLSILGVSELRRLD* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0938 176 SMART sant 8 58 IPR001005 -
Mtr3g0938 176 PANTHER KIN2 10 78 - -
Mtr3g0938 176 Gene3D - 9 62 - -
Mtr3g0938 176 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 60 IPR017930 -
Mtr3g0938 176 ProSiteProfiles Myb-like domain profile. 11 56 IPR001005 -
Mtr3g0938 176 SUPERFAMILY Homeodomain-like 10 59 IPR009057 -
Mtr3g0938 176 Pfam Myb-like DNA-binding domain 11 56 IPR001005 -
Mtr3g0938 176 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 10 78 - -
Mtr3g0938 176 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 10 57 IPR006447 GO:0003677
Mtr3g0938 176 CDD SANT 11 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0938 Mtr-Chr3 14144672 14145858 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g0938 Myb_DNA-binding 3.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0938 - - mtr:MTR_0036s0260 311.227