Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0918 ATGGCTGCAGCTTTGGTGGGAGGTGCGTTTCTCTCAGCTACCATTCAAACCATAGCTGAGAAGCTTACCTCATCAGAGTTTCGTGGTTTCGTAAAAAACACAAAGCTCAATTACTCACAACTGGCAGAGTTGAAAACAACACTGTTTGCTCTTCAAGCTGTGCTGGTTGATGCAGAGCAGAAACAGTTCAAAGATCTTCCTGTCAAACAATGGCTTGATGACTTGAAAGATGCAATATTTGATGCTGAAGATTTGCTTGACTTAATAAGCTACCATGTCCTGAAGTCCACGGTGGAGAAAACACCAGTTGATCAGCTGCAGAACCTGCCTTCAACTATAAAGATCAATTCCAAGATGGAGAAGATGTGTAAAAGGCTGCAAACTTTTGTCCACCAGAAAGATACACTTGGCTTGCAAAGAACGGTAAGTGGTGGAGTTTCTTCTAGAACCCCTTCAAGTTCAGTGCTAAATCAATCTGACGTGGTGGGTAGGAATGATGATAAAGATAGACTCATCAATATGCTGATATCAGACCGCAGCACCAGCAGAAATAATAATTTAGGTGTTGTCGCAATTTTGGGTATGGGAGGCGTCGGTAAAACGACCCTTGCACAGCTTGTTTACAATGATGTGAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCGGAGGATTTCGATGTTGTTAGAATAACCAAGTCTCTCCTTGAATCTGTTGTTAAAAGTACAACATCATCTGCTTCAAAGGTTTGGGAAAGCGATAATCTTGATATCCTTCGAGTTGAATTGAAAAAGAACTCGAGGGAGAAAAGATTTTTGTTTGTGTTAGATGATTTGTGGAATGATGATTACAATGATTGGCTTGAGCTAGTAAGTCCACTCAATGATGGAAAACCTGGAAGTTCGGTGATTATAACAACTCGCCAACAAAAAGTTGCAGAGGTGGCACACACATTTCCTATTCATGCATTAGAACCTCTATCTCATGAAGATTGTTGGTCTTTACTCTCGAAACATGCATTTGGTAGTAAGGACTGTGATCGCCGTAAATACCCAAACCTAGAAGAGATTGGCAGGAAGATTGCTAAAAAATGTGGTGGATTGCCAATAGCTGCCAAGACACTTGGAGGACTTATGCGTTCAAAGGTAGTTGAAAAGGAGTGGACTTCAATTCTCAACAGCAATATATGGAACTTACGAAATGATAAAGTTTTGCCTGCTTTGCATTTGAGTTATCAATATCTTCCTTCTCATTTGAAAAGATGTTTCGCCTATTGTTCTATTTTTCCAAAGGATTACCCACTTGAGAGGAAAAAACTGGTTTTGTTGTGGATGGCAGAAGGCCTCCTTGATTATTCTCAAGGCGAAAATGTGGTGGAGGAAGTTGGTGATGATTGTTTTGCTGAATTGTTATCAAGATCGTTAATTCAACAATTAAGCAATGATGCTCATGAAGAGAAGTTTGTCATGCATGACCTTGTCAATGATTTAGCTACATTCGTATCAGCAAAAAGTTGTTGTAGACTTGAATGTGGTGACATCCCTAAAAATGTTCGACACTTCTCATATAACCAAGAATACCATGACATTTTCATTAAGTTTGAGAAATTATACAGCTTCAAATGCTTGCGAAGCTTCCTATCCACTTACTCCACAATGTACAATTACAATTACTTATCCTTAAAGGTGGTTGATGATTTCCTACCATCACAAAAAAGGTTGCGTGTGTTATCCCTATCAAGGTATAAAAACATCACCAAGCTACCAGATTCAATTGGAAATTTGGTGCAGTTGCGGTATCTAGATATCTCCTTCACTAAAATCAAAAGTTTGCCTGATACAGCATATAAGCTTTACAATTTACAAACCTTGATTTTATCAAGTTGTGAGAGTCTCATTGAATTGCCAGTACAAATTGGAAATTTAGTCAGTCTACGTCATCTTGATATAAGTGGGACTAACATAAGTGAGTTGCCTGTGGAAATTGTGGGACTAGAAAACCTTCAAACTCTCACCCTTTTTATAGTGGGTAAGAGACATGTAGGGTTAAGTATCAAAGAGCTCGAAAAATTCCCAAACCTACATAGAACACTTACCATCAAGAACCTGGATAATGTTGTTGATGCCGGAGAGGCACACGATGCCAACCTGAAAAGCAAAGAAAAAATTGAGGATTTAGAGCTAATATGGGGAAAACAAAGTGACGAGTCGCAAAAAGTGAAAGTTGTGCTCGATATGCTGCAGCCGCCAATAAATCTGAAGAGCCTGAATATTTGCTTGTATGGTGGGACAAGCTTTCCAAGTTGGCTGGGAAATCCTTCATTTTCAAACATGGTATCCCTCCGTATTAGTAATTGTGAATATTGTGTGACACTTCCACCCATAGGGCAGCTACCTTCTCTCAAGGAGTTAGAAATATGTGGTATGATGATGTTGGATACAATTTGTTCGAAGTTCTATTATGTCCAGGGAGAAGTAGGTTCCAATTCTTCCTTCCAACCATTTCCATCCCTCGAGCTTATAAAATTTGACAACATGCCAAATTGGAATGAATGGTTTCCCTTTGAAGGTATAAAATTTGCATTTCCTCGACTCAAAACTATGGAGTTGCGTAATTGTCCTGAACTAAGGGGACATTTGCCTACCAACCTTCCTTGCATCGAAGAAATTGTAATAAAAGGTTGTTCTCATCTATTGGAAAAACCATCTACTTTGCATTGGTTGTCGTCAATAAAAGAAATGAATATCAATGGGCTTGGTGAAAAGACACAATTGTCATTGCTTGATAGTGATTCTCTATCTATGATGCAACATGTAGTGATTGAAAAGTGTGCTGAGCTATCAGTTGTGCCAAAATTGATTTTGAGAAGCATTTGTCTTACATACTTGAGACTCCATTCTCTTTCTTCTCTCACTGCATTTCCCTCAAGTGGTCTACCCACTTCATTGCAATCACTTCATATTAAAGATTGTGAGAACTTATCCTTTCTACCTTCTGAAACGTGGAGCAATTACACTTCACTTGTGAGTCTTTATTTATGGAGTAGTTGTGATGCACTTACATCCTTCCCACTTGATGGTTTCCCTGTGCTCCAAACACTTGACTTAAGTGATTGTAGGAGTCTGGATTCCATTTATATTTTAGAAACACCTTCACCTCAGTCGTCGAGCCTCCGACATCTTGAAATCAGATCCCATGATTTAATTGAATTGTTTAAAGTCAAGCTTCGGATGAACTCGCTCACTGCTCTTGAGAAGTTGTTTCTGAATCAAGGAGTGTTTTCATTTTGTGAAAGAGTTTGTCTACCTCCCAAATTACAATCAATTGTGAGTTTTTCCCAAATAACAACACCACCAGTTACAGAATGGGGTCTCCAAAACCAAACCACTCTTTCAGAACTGGTTATTGGAAATGATGATAATATAGTCACCACCTTGATGAAGGATTTGTTGCTACCTATCTCCCTTGTGGACCTGTCTATCATTGATCTCTATGAAATGAAGTCCTTCGATGGAAATGGGCTTCGACACCTCTCCTCTCTCGAATATCTCTATTTTTGGAATTGTCAACAGCTCGAGTCATTGCCAGAAAACTGCCTCCCTTCCTCGTTGAAATCACTTTCATTTCAAATGTGTGAGGAGCTTGAGTCATTACCGGAAGACAGCCTCCCCGACTCTCTTAAGCAACTGACCATTTGGGGATGCCCATTGTTAGAAGAAAGGTATAAAAGGAAAGAACATTGGTCCAAAATCGCTCACATCCCTGTCATAGACATAAATGAAAAAGTCACAATATGA 3807 0.3916 MAAALVGGAFLSATIQTIAEKLTSSEFRGFVKNTKLNYSQLAELKTTLFALQAVLVDAEQKQFKDLPVKQWLDDLKDAIFDAEDLLDLISYHVLKSTVEKTPVDQLQNLPSTIKINSKMEKMCKRLQTFVHQKDTLGLQRTVSGGVSSRTPSSSVLNQSDVVGRNDDKDRLINMLISDRSTSRNNNLGVVAILGMGGVGKTTLAQLVYNDVKVEQHFDFKVWVCVSEDFDVVRITKSLLESVVKSTTSSASKVWESDNLDILRVELKKNSREKRFLFVLDDLWNDDYNDWLELVSPLNDGKPGSSVIITTRQQKVAEVAHTFPIHALEPLSHEDCWSLLSKHAFGSKDCDRRKYPNLEEIGRKIAKKCGGLPIAAKTLGGLMRSKVVEKEWTSILNSNIWNLRNDKVLPALHLSYQYLPSHLKRCFAYCSIFPKDYPLERKKLVLLWMAEGLLDYSQGENVVEEVGDDCFAELLSRSLIQQLSNDAHEEKFVMHDLVNDLATFVSAKSCCRLECGDIPKNVRHFSYNQEYHDIFIKFEKLYSFKCLRSFLSTYSTMYNYNYLSLKVVDDFLPSQKRLRVLSLSRYKNITKLPDSIGNLVQLRYLDISFTKIKSLPDTAYKLYNLQTLILSSCESLIELPVQIGNLVSLRHLDISGTNISELPVEIVGLENLQTLTLFIVGKRHVGLSIKELEKFPNLHRTLTIKNLDNVVDAGEAHDANLKSKEKIEDLELIWGKQSDESQKVKVVLDMLQPPINLKSLNICLYGGTSFPSWLGNPSFSNMVSLRISNCEYCVTLPPIGQLPSLKELEICGMMMLDTICSKFYYVQGEVGSNSSFQPFPSLELIKFDNMPNWNEWFPFEGIKFAFPRLKTMELRNCPELRGHLPTNLPCIEEIVIKGCSHLLEKPSTLHWLSSIKEMNINGLGEKTQLSLLDSDSLSMMQHVVIEKCAELSVVPKLILRSICLTYLRLHSLSSLTAFPSSGLPTSLQSLHIKDCENLSFLPSETWSNYTSLVSLYLWSSCDALTSFPLDGFPVLQTLDLSDCRSLDSIYILETPSPQSSSLRHLEIRSHDLIELFKVKLRMNSLTALEKLFLNQGVFSFCERVCLPPKLQSIVSFSQITTPPVTEWGLQNQTTLSELVIGNDDNIVTTLMKDLLLPISLVDLSIIDLYEMKSFDGNGLRHLSSLEYLYFWNCQQLESLPENCLPSSLKSLSFQMCEELESLPEDSLPDSLKQLTIWGCPLLEERYKRKEHWSKIAHIPVIDINEKVTI* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0918 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 429 IPR027417 -
Mtr3g0918 1268 Coils Coil 41 61 - -
Mtr3g0918 1268 Gene3D - 329 413 IPR042197 -
Mtr3g0918 1268 SUPERFAMILY L domain-like 492 921 - -
Mtr3g0918 1268 Gene3D Ribonuclease Inhibitor 1017 1253 IPR032675 -
Mtr3g0918 1268 SUPERFAMILY L domain-like 927 1243 - -
Mtr3g0918 1268 Pfam NB-ARC domain 167 397 IPR002182 GO:0043531
Mtr3g0918 1268 Gene3D - 146 322 IPR027417 -
Mtr3g0918 1268 Gene3D - 15 134 - -
Mtr3g0918 1268 Gene3D Ribonuclease Inhibitor 886 1003 IPR032675 -
Mtr3g0918 1268 Gene3D Ribonuclease Inhibitor 721 885 IPR032675 -
Mtr3g0918 1268 Gene3D Ribonuclease Inhibitor 538 720 IPR032675 -
Mtr3g0918 1268 Gene3D - 414 503 IPR036388 -
Mtr3g0918 1268 PANTHER DISEASE RESISTANCE PROTEIN RP 32 951 IPR044974 GO:0006952
Mtr3g0918 1268 PANTHER OS05G0414200 PROTEIN 32 951 - -
Mtr3g0918 1268 SMART LRR_typ_2 598 621 IPR003591 -
Mtr3g0918 1268 SMART LRR_typ_2 1181 1205 IPR003591 -
Mtr3g0918 1268 SMART LRR_typ_2 645 668 IPR003591 -
Mtr3g0918 1268 PRINTS Disease resistance protein signature 189 204 - -
Mtr3g0918 1268 PRINTS Disease resistance protein signature 269 283 - -
Mtr3g0918 1268 PRINTS Disease resistance protein signature 368 382 - -
Mtr3g0918 1268 PRINTS Disease resistance protein signature 619 635 - -
Mtr3g0918 1268 Pfam Rx N-terminal domain 10 99 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0918 Mtr-Chr3 13602726 13607042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0918 588 683 WRKY Transcription Factor Family AT4G12020 43.299 7.82e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0918 - - mtr:MTR_3g032370 1726.84