Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0917 ATGGCGGCAACTATGATAGGAGGCGCTTTTCTCTCGGCAACTATGCAAACCTTGTTTGAGAAACTTGCTTCAACAGAGTTTCTTGATTACATCAAAAACACCAAGCTGAATGTCTCACTCTTGAGGCAATTAAAAACAACCCTGCTCACACTTCAGGCTGTACTGGATGATGCGGAGGAGAAGCAGATGAACAATCTTGCTGTCAAACAATGGCTTGATGACTTGAAAGACGCTATCTTTGATGCTGAGGATTTACTCGATCAAATAAGTTATGACTCCCTCCGATGCAAGATGGAGAAGAAACAAGCTAGAAACAAAACTAATCAGGTGTGGAACTTACTTTCATCCCCTTTTAAAAACATCTATGGAGAGATCAATTCCCATATGAAGATCATGTGTGAAAGCCTGCAACTTTTTGCACAAAATAAAGATATATTAGGTTTGCAAACTAAAAGTGCTAGAGTTTCTCGTAGAACACCTTCAAGTTCAGTGGTAAATGAATCTGTCATAGTGGGTAGGAAGAATGACAAAGAGACAATAATGAACATGTTGCTATCACAGAGAGACACAATCCATAATAATATAGGTGTTGTTGCAATTTTGGGCATGGGAGGTTTAGGAAAAACTACCCTTGCTCAACTTGTCTACAATGATAAAGAAGTTCAACAATATTTTGATTTGAAGGCATGGGCTTGCGTGTCTGAGGATTTTGATATTATGAGAGTAACCAGGTCTCTCCTTGAATCGGTCACTTCAAGAACTTGGGATAGCAATAATCTTGATATCCTTCGAGTTGAGTTAAAGAAAAACTTGAGGGAGAAAAGATTTTTGTTTGTGTTAGATGATATGTGGAATGACAATTATAATGATTGGGGTGAACTAGTAAGTCCCTTCAGTAATGGAAAACCTGGAAGCATGGTGATTATAACAACACGCCAACGAAAAGTTGCTGAGGTGGCACACACATTTCCTATACATGAATTAAAACTTCTATCAAATGAAGATTGTTGGTCTTTACTCTCAAAGCATGCATTGGGAAGTGATGAGTTTCACCATAGTACAAACACAACCCTTGAAGAAATAGGAAGGAAGATTGCAAGAAAGTGTGGAGGATTGCCAATTGCCGCTATAACAATAGGAGGGCTTCTACGTTCAAAGGTAGATATAACAGAGTGGACTGCAATTTTAAACAATGACATATGGAACTTATCAAATGATAATATTCTTCCTGCTTTGCATTTAAGTTATCAATATCTTCCATCTCACTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCAAAGGACTACCCACTTGATAGGAAGAAATTGATTTTGTTGTGGATGGCAGAAGGATTCCTTGATTGTTCTCAAGGTGGGAAAAAGTTGGAGGACTTGGGTGATGATTGGTTTGCTGAATTGTTATCGAGATCGTTAATTCAACAATTAAGTGATGATGCTCGTGGAGAAAAGTTTGTTATGCATGACCTTGTAAATGATTTAGCTACATTCATATCAGGAAAAAGTTGTTGCAGGCTTGAATGTGGTGACATCCATAAAAATGTTCGTCACTTCTCATATAACCAAGAATACTATGACATTTTCATCAAGTTTGAGAAATTATATAGCTTCAAATGCTTGCGAAGCTTCCTATCCACTTACTCCACAATGTTCAATTACAATTACTTATCCTTAAAAGTGGTTGATGATTTCCTACCATCACAAAAAAGGTTGCGTGTGTTATCCCTATCAAGGTATAAAAACATCACCAAGCTACCAGATTCAATTGGAAATTTGGTGCAGTTGCGGTATCTAGATATCTCCTTCACTAAAATCAAAAGCTTGCCTGATGCAACATATAAGCTTTACAATTTACAAACCTTGATTTTATCAAGTTGTGAGAGTCTCGTTGAATTGCCAGTACAAATTGGAAATTTAGTCAGTCTACGTCACCTTGATATAAGTGGAACTAACATAAGTGAGTTGCCTGTGGAAATTGTGGGACTAGAAAACCTTCAAACTCTCACCCTTTTTATAGTGGGTAAGAGACATGTAGGGTTAAGTATCAAAGAGCTCGGAAAACTCCCAAACCTACATAGAACACTTACCATCAAGAACCTGGATAATGTTTTTGATTCCGTAGAGGCACACGATGCCAACTTGAAAAGCAAAGAAAAAATTGAGGATTTAGAGCTAATATGGGGAAAACAAAGTGACGAGTCGCAAAAAGTGAAAGATGTGCTCGATATGCTGCAGCCGCCAATAAATCTGAAGAGCCTGAATATTTGCTTGTATGGTGGGACAAGCTTTCCGAGTTGGCTGGGAAATTCTTCATTTTCTAACATGGTATCCCTCCGTATTAGTAATTGTGAATATTGTGTGACACTTCCACCCATAGGGCAGCTACCTTCTCTCAAGGAGCTAGAAATATGTGGTATGATGATATTGGATACAATTTGTTCGAAGTTCTATTATGTCCAGGGAGAAGTAGGTTCCAATTCTTCCTTCCAACCATTTCCATCCCTCGAGCTTATAAAATTTGACAACATGCCAAATTGGAATGAATGGCTTCCTTTTGAAGGTATAAAATTTGCTTTTCCTCGACTCAAAACTATGGAGTTGCGTAATTGTCCTGAACTAAGGGGACATTTACCTACCAACCTTCCTTGCATCGAAGAAATTGTAATCAAAGGTTGTTCTCATCTATTGGAAAAACCATCTACTTTGCATTGGTTGTCGTCAATAAAAGAAATGAATATCAACGGCCTTGGTGAAAAGACACAGTTGTCATTGCTTGATAGTGATTCTCTATCTATGATGCAACATGTAGTGATTGAAAAGTATGTTGAGCTATCAGTTGTGCCAAAATTGATTTTGAGAAGCACTTGTCTTACATACTTGAGACTCCATTCTCTTTCTTCTCTCACTGCATTTCCCCCAAGTGGTCTACCCACTTCATTGCAAATACTTCATATTAAAGATTGTGAGAACTTATCCTTTCTACCTTCTGAAACGTGGAGCGATTACACTTCACTTGTGAGTCTTTATTTATGGAGTAGTTGTGATGCACTTACATCCTTCCCACTTGATGGTTTCCCTGTGCTCCAAACACTTGACTTAAGTGATTGTAGGAGTCTGGATTCCATTTATATTTTAGAAACACCTTCCCCTCAGTCGTCGAGCCTCCGACATCTTGAAATCAGATCCCATGATTCAATTGAATTGTTTAAAGTCAAGCTTCGGATGAACTCGCTTACCGCTCTTGAGAAGTTGTTTCTGAATCAAGGAGTGTTTTCATTTTGTGAAGGAGTTTGTCTACCTCCCAACTTACAATCAATTGTGAGTTTTTCCCAAATAACAACACCACCAGTTACAGAATGGGGTCTCCAAAACCAAACCACTCTTTCGAAATTGGTTATTGGAAATGATGATAATATAGTCACCACCTTGATGAAAGAGTTGTTGCTGCCTATCTCCCTTGTGGACCTGTCTATCATTGATCTCTATGAAATGAAGTCATTTGATGGAAATGGGCTTCGACACCTCTCCTCTCTCCAATATCTCTATTTTTGGAATTGTCAACAGCTCGAGTCATTGCCAGAAAACTGCCTCCCTTCCTCGTTGAAATCACTTTCATTTCAAATGTGTGAGGAGCTTGAGTCATTACCGGAAGACAGCCTCCCCGACTCTCTTAAGCAACTGACCATTTGGGGATGCCCATTGTTAGAAGAAAGGTATAAAAGGAAAGAACATTGGTCCAAAATCGCTCACATCCCTGTCATAGATATAAATGAAAAAGTCACAATATGA 3810 0.3835 MAATMIGGAFLSATMQTLFEKLASTEFLDYIKNTKLNVSLLRQLKTTLLTLQAVLDDAEEKQMNNLAVKQWLDDLKDAIFDAEDLLDQISYDSLRCKMEKKQARNKTNQVWNLLSSPFKNIYGEINSHMKIMCESLQLFAQNKDILGLQTKSARVSRRTPSSSVVNESVIVGRKNDKETIMNMLLSQRDTIHNNIGVVAILGMGGLGKTTLAQLVYNDKEVQQYFDLKAWACVSEDFDIMRVTRSLLESVTSRTWDSNNLDILRVELKKNLREKRFLFVLDDMWNDNYNDWGELVSPFSNGKPGSMVIITTRQRKVAEVAHTFPIHELKLLSNEDCWSLLSKHALGSDEFHHSTNTTLEEIGRKIARKCGGLPIAAITIGGLLRSKVDITEWTAILNNDIWNLSNDNILPALHLSYQYLPSHLKRCFAYCSIFPKDYPLDRKKLILLWMAEGFLDCSQGGKKLEDLGDDWFAELLSRSLIQQLSDDARGEKFVMHDLVNDLATFISGKSCCRLECGDIHKNVRHFSYNQEYYDIFIKFEKLYSFKCLRSFLSTYSTMFNYNYLSLKVVDDFLPSQKRLRVLSLSRYKNITKLPDSIGNLVQLRYLDISFTKIKSLPDATYKLYNLQTLILSSCESLVELPVQIGNLVSLRHLDISGTNISELPVEIVGLENLQTLTLFIVGKRHVGLSIKELGKLPNLHRTLTIKNLDNVFDSVEAHDANLKSKEKIEDLELIWGKQSDESQKVKDVLDMLQPPINLKSLNICLYGGTSFPSWLGNSSFSNMVSLRISNCEYCVTLPPIGQLPSLKELEICGMMILDTICSKFYYVQGEVGSNSSFQPFPSLELIKFDNMPNWNEWLPFEGIKFAFPRLKTMELRNCPELRGHLPTNLPCIEEIVIKGCSHLLEKPSTLHWLSSIKEMNINGLGEKTQLSLLDSDSLSMMQHVVIEKYVELSVVPKLILRSTCLTYLRLHSLSSLTAFPPSGLPTSLQILHIKDCENLSFLPSETWSDYTSLVSLYLWSSCDALTSFPLDGFPVLQTLDLSDCRSLDSIYILETPSPQSSSLRHLEIRSHDSIELFKVKLRMNSLTALEKLFLNQGVFSFCEGVCLPPNLQSIVSFSQITTPPVTEWGLQNQTTLSKLVIGNDDNIVTTLMKELLLPISLVDLSIIDLYEMKSFDGNGLRHLSSLQYLYFWNCQQLESLPENCLPSSLKSLSFQMCEELESLPEDSLPDSLKQLTIWGCPLLEERYKRKEHWSKIAHIPVIDINEKVTI* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0917 1269 Gene3D - 330 414 IPR042197 -
Mtr3g0917 1269 Coils Coil 41 61 - -
Mtr3g0917 1269 PANTHER DISEASE RESISTANCE PROTEIN RP 48 1008 IPR044974 GO:0006952
Mtr3g0917 1269 SUPERFAMILY L domain-like 932 1244 - -
Mtr3g0917 1269 Gene3D Ribonuclease Inhibitor 1156 1258 IPR032675 -
Mtr3g0917 1269 SUPERFAMILY L domain-like 493 923 - -
Mtr3g0917 1269 PRINTS Disease resistance protein signature 197 212 - -
Mtr3g0917 1269 PRINTS Disease resistance protein signature 270 284 - -
Mtr3g0917 1269 PRINTS Disease resistance protein signature 369 383 - -
Mtr3g0917 1269 PRINTS Disease resistance protein signature 620 636 - -
Mtr3g0917 1269 Gene3D - 14 131 - -
Mtr3g0917 1269 Gene3D Ribonuclease Inhibitor 546 930 IPR032675 -
Mtr3g0917 1269 Pfam Rx N-terminal domain 10 103 IPR041118 -
Mtr3g0917 1269 SMART LRR_typ_2 599 622 IPR003591 -
Mtr3g0917 1269 SMART LRR_typ_2 646 669 IPR003591 -
Mtr3g0917 1269 SMART LRR_typ_2 1182 1206 IPR003591 -
Mtr3g0917 1269 PANTHER - 48 1008 - -
Mtr3g0917 1269 Gene3D - 151 323 IPR027417 -
Mtr3g0917 1269 Gene3D - 415 503 IPR036388 -
Mtr3g0917 1269 Pfam NB-ARC domain 176 398 IPR002182 GO:0043531
Mtr3g0917 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Mtr3g0917 1269 Gene3D Ribonuclease Inhibitor 931 1150 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0917 Mtr-Chr3 13592524 13596982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0917 589 684 WRKY Transcription Factor Family AT4G12020 43.299 5.77e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0917 - - mtr:MTR_3g032370 1896.32