Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0906 ATGGCCACTGTTACTACACAGGCTTCAGCCGCCATTTTCCGGCCATGTGGATTGAAATCAAGGTTCCTTACCGGTTCTTCTGGTAAGTTGAACAGAGAAGTGGCTATTAGGCCAATGGGGTGTTCACCTTCTGCTTCTTTTAAGGTTGAAGCTAAGAAAGGAGAGTGGTTACCTGGCTTGGCTTCTCCAGGTTACCTTACTGGCAGTCTTCCCGGAGACAACGGATTCGATCCATTGGGACTAGCCGAGGATCCAGAGAACTTGAAATGGTTTGTTCAAGCCGAGCTTGTGAATGGACGTTGGGCTATGTTAGGTGTTGCAGGGATGTTACTCCCTGAAGTCTTCACCAACATTGGAATCATCAACGTTCCAAAATGGTATGATGCAGGGAAAGAAGAATACTTTGCTTCATCTTCAACACTCTTTGTGATCGAGTTCATTTTGTTCCATTACGTCGAGATTAGAAGATGGCAAGACATTAAGAACCCTGGTAGCGTTAACCAAGATCCTATCTTCAAGCAATACAGTTTGCCAAAGGGTGAGGTTGGTTACCCCGGTGGAATTTTTAACCCTTTGAACTTTGCACCAACTTTGGAGGCTAAAGAGAAGGAAATTGCTAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTTATCATTCAGCACAATGTGACAGGAAAAGGACCATTTGATAACCTCTTGCAGCACCTTTCAGACCCATGGCACAACACCATTGTTCAAACACTGAGTGGCAGCAACTAA 762 0.4488 MATVTTQASAAIFRPCGLKSRFLTGSSGKLNREVAIRPMGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSGSN* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0906 253 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Mtr3g0906 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 251 IPR001344 GO:0009765|GO:0016020
Mtr3g0906 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 251 - -
Mtr3g0906 253 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Mtr3g0906 253 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0906 Mtr-Chr3 13402635 13405332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0906 38 250 Chloroplast and Mitochondria Gene Families AT3G61470 52.703 2.63e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0906 K08910 - rcu:8263414 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0906 3 13402635 13405332 Mtr3g0906 3 13402635 13405332 ECH