Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0901 ATGGAGTTTAGCACAGAGGAAAAAGCTATAAAATTTTACAAAGCCTATGCTCGTTTCAATGGGTTTGTCGTAAGAAAGGACGATGTGGTAAAGGATCACGAGGGAAAAATGGTTCCGCGACGATTACTTTGCAATAAAGTGGGAAAGAGTGAAACTAAAAATAAGAAGAATGAAGATAGTATTAGGCAAACCATGCGAACTGGATGTCATGCTAGACTTCGAGTAGCCTATGATTTCATTGAGAAGATTTGGAAAGTTACTAATTTTGTGCCCAATCACAACCATGAATCATGTCCTCCAAATCTTGTCCATTTGATTCCGAATTATAGGAAATTGAGTGAATCAGATAAACAGATTGTCAGTGGTTTGCATTCTCAAGGTGTAAGAACATGTCATATACTAGGTTTTTTAATGGGCCAAAAAGGAGGGCATGAAAATCTTGGATTTATCAAAAAGGATTTATATAACTTCACTGATCATGAAGGAAGGGTTAGAATTGAAGGTGGGGATACTTTTGCTACTTTGAGTTATTTTCAGGATGATAGACGGTTAGAAAATATATTTTGGGCAGATTCTGCAAGCAGGCTTGATTATGAATGTTTTGGCGATGTGGTTCTCTTTGACGCCACTTATAAAAAGAACAGGTATAACAAGCCGCTTGTAATTTTAACAGGATACAACCACCATGGTGAAACGACCATTTTTGCATGTGCTTTAATTTCTGATGAAAAAATAGAGACATATAAGTGGGTGTTAAATATGTTTTCAAAGGCCATGTACGAAAAACATCCAAAAACGATTGTTACTGATGGAGATAAATCAATGAGGAAAGCTGTTAGAGTAGTATTTCCAAATTCAAGGCATCGCCTTTGTTCATGGCATCTACATCAAAATGCTCGTGTGCATGTAAAAGATCCCAAATTCTTAGAAGAGTTCAACAAACTCATATATTCTAATTACACACCTGAACAATTTGAGTCTGCGTGGAAGAGGGTTGTTGACAGTTATGGTGTACCAAAGAATAAGTGGGTGATTAAAACATATAAATTGAAGCGAATGTGGGCAAGTTCATACATGCGAGACCATTTTGTGTGTAGAGTTAGAACAACATCGATATGTGAAGGTGTGAATTCATTTATCAGGAAGTACAAAAATAGCCTTGTTGATTTTCTGCATAATTTTGAAAGAGCTGTCAAAGACTACAGACATAATGAATTATTGGCTGATTTCAAATCATTTTATTATAAACCTGTGTTGACAACTTCCTTGCCTAGATTTGAGCGTGAAGCTTCAGAAATATTCACTTTTAAAAAGTTCCTATAA 1323 0.3568 MEFSTEEKAIKFYKAYARFNGFVVRKDDVVKDHEGKMVPRRLLCNKVGKSETKNKKNEDSIRQTMRTGCHARLRVAYDFIEKIWKVTNFVPNHNHESCPPNLVHLIPNYRKLSESDKQIVSGLHSQGVRTCHILGFLMGQKGGHENLGFIKKDLYNFTDHEGRVRIEGGDTFATLSYFQDDRRLENIFWADSASRLDYECFGDVVLFDATYKKNRYNKPLVILTGYNHHGETTIFACALISDEKIETYKWVLNMFSKAMYEKHPKTIVTDGDKSMRKAVRVVFPNSRHRLCSWHLHQNARVHVKDPKFLEEFNKLIYSNYTPEQFESAWKRVVDSYGVPKNKWVIKTYKLKRMWASSYMRDHFVCRVRTTSICEGVNSFIRKYKNSLVDFLHNFERAVKDYRHNELLADFKSFYYKPVLTTSLPRFEREASEIFTFKKFL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0901 440 PANTHER OS02G0262500 PROTEIN 1 439 - -
Mtr3g0901 440 Pfam MULE transposase domain 204 298 IPR018289 -
Mtr3g0901 440 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 439 IPR031052 GO:0006355
Mtr3g0901 440 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0901 Mtr-Chr3 13345779 13347151 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g0901 MULE 9.5e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0901 - - ccaj:109792835 481.87