Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0896 ATGTTTCTCAACAAAAAGCTCGTTGACGATTCAATCTTGGCAAACCTGAAGAAAACACAGGTTCTAACTGTTGTACTTAATGATGATGATGATGTTGTTATCAATGAATGGTCGGTTGCGCTGAGATATGCTGTATTACAGGTTGACTTTTACAACGACCCTGAAGTACATGACAAATTTGAATTAAAATTGTGGAGGTATATTTCAAATGATTTTGATATTTTCAGGGTTTATGAAACCATTCTAGAATCTATTACTTCACAAACAATCAGTAATGATAACACGTATACAAAAAGAAACGAGACGAGTGACTTGAATATTGTTTTCCCACAGTTTCTGTTAATATTGGATGACGTTCTGGATGCAAGATGTGTCAATTGGACATTACTTATAGATATCTTAAATGCTGGAAAAAGAGGAAGCGAGATCATCATCACAACACGAGATGAAAGACTACCAAAATCCATGCAAACTTTTTCTTATGTCCACTATTTGAGACCTCTAGAAAGCGAAGATTGTTGGTCTTTAGTTGCCAGACATGCATTTGGGGCATGTAACGAGCAACAACGATCCAATCTAGAAGAAGTAGGCAAGAAAATTGCAAAAAAATGTGATGGATTACCATTAGCTGTTATAGAACTTGCGGAATTTCTTCACATTGAATTGTCCCCGGATTACTGGAATAATGTGCTAATACGTGACATTTGGGAATTTGTACATTATAAGGTGCAACCTGCTCTACAATTGAGCTACCATTATCTATCGGCTCCTTTAAAACAGTGCTTTGAATATTGTTCAATTTTTCCGAAGAAGTCCATCTTAGAAAAAAATGTGGTAGTTCAGTTGTGGATTACAAGAGGGTTGGTAGAATCATCCGCGGACCAGGAAAAAGTCGGAGAAGAATACTTTGATGAACTAGTGTCAAGATCGTTAATAAATCGACAATCTATTGGTGATGAGGAAGAAATCTTTGAAATGTATAGCCTCACCAATGAATTAGCTACAATGATTTCATCTTCATATTGTACCAGGTTGGATGAACAGAACCTACATGAAAGGATACATAATTTATCATACAATAGAGGGCTATATGACTCATTTAATAAATTTGATAAATTGTATGCAGTAAAAGGTCTACGTACCTTTCTAGCATTACCATTACAAAAACAACTGCCTTTTTGTTTGTTATCGAACAAGGTAGTACATGACTTGCTGCCAACAATGAAACAATTACGTGTTTTGTCCTTGTCAAACTACAGGAGTATCACCGAGATTCCCAACTCTATTGAAAATTTGTTATGCCTGCGGTACTTAAATCTTTCCCACACTAAGATTGAAAGGTTGCCTTCTGCAACATGCAAGCTTTACAATCTGCAGTTCTTGTTGTTGGCAGGCTGTAGAAAGCTCATTGAATTTCCGGAGGATATGGGGAAATTGGTTAATCTCCGCCACCTTGACATTAGTGACAGTACTGCATTGAGGGAGATGCCTGTACAAATAGCCAAACTAGAAAATTTCCATACTTTGTCGGACTTTGTTGTCGGCAAGCAGAATGATGGATTGAAGGTAGCGGAGCTGGAAAATTTCCCCACCTACATGGAAAACTTTCTATCTCACAGCTACAAAATGTTAATGACCCCTTTGAAGCAGATCAAGCCAAGATTAAGATGA 1671 0.3704 MFLNKKLVDDSILANLKKTQVLTVVLNDDDDVVINEWSVALRYAVLQVDFYNDPEVHDKFELKLWRYISNDFDIFRVYETILESITSQTISNDNTYTKRNETSDLNIVFPQFLLILDDVLDARCVNWTLLIDILNAGKRGSEIIITTRDERLPKSMQTFSYVHYLRPLESEDCWSLVARHAFGACNEQQRSNLEEVGKKIAKKCDGLPLAVIELAEFLHIELSPDYWNNVLIRDIWEFVHYKVQPALQLSYHYLSAPLKQCFEYCSIFPKKSILEKNVVVQLWITRGLVESSADQEKVGEEYFDELVSRSLINRQSIGDEEEIFEMYSLTNELATMISSSYCTRLDEQNLHERIHNLSYNRGLYDSFNKFDKLYAVKGLRTFLALPLQKQLPFCLLSNKVVHDLLPTMKQLRVLSLSNYRSITEIPNSIENLLCLRYLNLSHTKIERLPSATCKLYNLQFLLLAGCRKLIEFPEDMGKLVNLRHLDISDSTALREMPVQIAKLENFHTLSDFVVGKQNDGLKVAELENFPTYMENFLSHSYKMLMTPLKQIKPRLR* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0896 556 Gene3D Ribonuclease Inhibitor 384 545 IPR032675 -
Mtr3g0896 556 Gene3D - 257 336 IPR036388 -
Mtr3g0896 556 PANTHER DISEASE RESISTANCE PROTEIN RP 51 526 IPR044974 GO:0006952
Mtr3g0896 556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 265 IPR027417 -
Mtr3g0896 556 Pfam NB-ARC domain 45 230 IPR002182 GO:0043531
Mtr3g0896 556 PRINTS Disease resistance protein signature 106 120 - -
Mtr3g0896 556 PRINTS Disease resistance protein signature 204 218 - -
Mtr3g0896 556 PRINTS Disease resistance protein signature 477 493 - -
Mtr3g0896 556 Gene3D - 45 162 IPR027417 -
Mtr3g0896 556 SUPERFAMILY L domain-like 326 511 - -
Mtr3g0896 556 Gene3D - 168 255 IPR042197 -
Mtr3g0896 556 PANTHER - 51 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0896 Mtr-Chr3 13285739 13287534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0896 405 556 WRKY Transcription Factor Family AT4G12020 29.070 5.56e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0896 - - mtr:MTR_3g435210 891.723