Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0890 ATGGCGAGTTTTCTGATTGATTTGGCAAAGCTTTATGTGGAGAAATGTATAAATGGGGTGATTGCAGAGTCAAGTTATATATGTTGCTTCACGCGCATTGCTGATGATTTTGAAGAAGAAAGAGCTTGGTTGGAAGATGCAACGACAACTATCAAGACGCGTGTTGATGTGGCAACCATGAGAGGAGAGGATGTTCAAGCTAATGCTCTTTTTTGGGAAGAAGAAGCTGAAAAGCTCATTCAAGAAGACACCAAAACAAATCAAAAATGTTTTTTTGGATTTTGCCCTCATTGCATATGGCGATATAGAAGGGGAAAGGAACTGACAAATAAGAAGGAGCAAATTAAAAGATTGATTGAAACTGGAGAGAAACTTTCAATTGGATTCACTGCTCGTCTTCCAGATGTTGAATGCTATTCACCCGGACAGTATATTCCTTTTAAAAGCAGAGAATCCGAATACAATGAACTTTTAGGTGCTCTGAAAGATGACAACAATTTGATAATCGGGTTGCATGGGATGGGGGGCACAGGAAAAACTACAATGGCTATAGAAGTGGGTAAGGAACTTAAGCAATCCAAACAATTTACTCAAATTATCCACACGACAGTGTCATTTTCTCCTGATATCAGAAAGATTCAAGATGATATTGCTCGACCCTTGGGATTGAAATTTGATGACTGTAATGAATCAGACCGACACAAAATACTATGGAGCAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGGAGATATCAATTTTGACGAAATAGGGATTCCTGATAGTGACTATCTCAAAGGCTGTAGAATTCTTGTACCCACGCGCAATCTCTTAGTGTGCAACAGATTAAGATGCAGTAAGACAATCCAATTGCATCTCTTATCTGAAGAAGATGCGTGGATCATGTTCCAAAGGCATGCTGGTCTAAGCAAAATTTCATCTAAATTTTTTCTCTTAAAGGGCCGTAAAATTGCAACTGAATGCAAAAGGTTACCAATTGCAATTGCTGTTACAGCCAGTAGTTTGAAGGGTGAGAAACATCGAGAAGAATGGGATATGGCCTTATATTCCTTTCAGAAACATATGCCCATGCATGGCATTGATGACGATCTCGTTAGAATTTTTAGCTGCTTTAAGTTTAGCTATGATAATATGAAGGATGAGAAAGCAAAGAGACTATTCCTCTTGTGTTCTATATTTCGAGAAGATGAAAAAATTCCTACTGAAATGTTAACCAGACTTGGCATCGGAGGAGGCCTTTTTGGGGAAGATTATTTCAGGTACGAAGATGTTCGAAATCAAGCTGTTGTATGCAAAAATAAACTCCTAGTTTCTTGTTTGTTGTTGGAGGCCAATCAAAGCAGAGTGAAAATGCATGACTTGGTTCGTGATGTAGCCCAATGGATAGCAGACAAAGAGATTCAAACAGTGAAGTTGTATGATAAAAATCAAAAGGCAATGGTTGAAAGGAAAATGAATATTAAATATTTGTTATGTGAAGGCAAGCTTAAGGATTTGTTTTCCTTTAAGCTTGATGGTTCCAGCCTGGAGATTCTAATTGCCACTGTGCATAAAGATGAAGGCTGCCACAATGTGAAAATCGAAGTCCCGAATTCATTTTTTGAAAATAGTACGGGCCTTCGTGTTTTTCATTTAATCTATGATCATTATTCTAATCTATCTCTATCATTACCTCAGTCAATTCAGTTGTTGAATAATATTCGATCTCTTCTCTTCTCACGTGTCGATTTGGGTGACATCTCTATTTTGGTAAACCTGCAAAGCCTTGAGACTCTTGATTTGGATGGTTGTGAAATTGATGAATTGCCTCATGGAATTACAAAATTAAAGAAATTTAGATTATTGAACTTGGACTATTGTAAAATTGCAAGGAATAATCCTTTTCAAGTGATTGAAGGATGCTCATCACTTGAAGAGTTGTATTTCAGAGGTAGTTTTAATGATTTTTGCCGAGAAATAACTTTCCCTGAATTGCAAAGGTTTTATATTGATGAAAATTCAGGTTCAGAGGATGATTTATTGTTGAAGTGTGTGTCTTATGTAGACAACGATGAGATTTTCCTATCCAAAACAACACTCATGTATTGTATGCAAAAATCAGAGGTTCTTAGACTAGGAAGAATCGTGGGGGAATGGAGAAATATCATACCTGAAATGGTTCCTTTAGATCAAGGTATGAATGATCTAGTTGAGCTTCATTTAAGATGCATTTCACAACTAAAATGCCTCATTGACACTATGCATACCGGATATCAAGTATCAAAAGTCTTCTGCAAGTTGGTTGTACTAAAGCTTGAAGGAATGGATAATTTGGAAGAATTGTTCAATGGCTCTCTTTCCTTTGACTCTCTGAACAGTTTAGAGAAGCTGTCCATCAAGGATTGTACAAATTTGAAAAGCTTATTTAAGTGCAACCTAAACCTATTCAATCTAAAGAGCGTGTTGTTGAAAAGATGCCCGATGTTGATCTCCCTGTTTCAACTGTCAACTGCTGTTAGCCTAGTGTTGTTGGAGAGATTGGAAATAAATGACTGTGGATGTCTTGAATACATAATAGATGAAAGGAACGAGGAGGAATTGAGAGGTGAAATAGTTGATGATAATGACATCGCAAGTCATGGCTCATTGTTTCAGAAACTGGAAATTCTTAGGATTAAGAAGTGTCCAAAAATTGAATTAATACTTCCACTTCTCTCTGCTGGTGATCTTCCAGCACTAGAATCCATCACAATGAAAAGTTGTGATTTGCTGAAATACATATTTGACAAAAATGTTGAACTTGGTTCCCTCAAACAATTGGAGCTTGATAGGATACCAAATTTCATTGACATTTTCCCAGAGTGTAATCGTACCATGACTCCGTCTATTAAGGGGACATCTTCCAAGCCACAAGCACAATCAGACCCAATCAAATGCAATATCTTTTCATGGATTGATATATATTGTTGTGGTAAAAAAAATGGGCACAAATCGAGGAGTACTGAAATCCCATTGGTTTCTGAAGATAAATCGCCGGACAACTTAATGTTACAGGAATCAAATTCATATTCCCTGGATTACATAAGCATATGGGAACGTGCTCAATGTCTTTTAAGACCATCAGATATCTTGTGCAATATTAAAGAGATTACACTGAGGAATATTTTGAAGATGAGATCGGTATTCATCCTATCTATTGCTCCAAAAATGTTGTTGGAAACTTTGACAATTAGGAACTGTGATGAATTAAAGCACATTATTATAGACACCGGAGATCATGACAACTCTGGTGCCAATAACTGGGGCACTGTCTTCCCAAATTTAAGAAAGATTGAAGTTGAAGATTGTGAGCGATTGGAAGACATAATTGGACACTACACTGATGGTCATCAAAACCACGTTGAGATTCACCTTCATCTTCCAGTATTGGAAGGTCTCTATCTTGAGAATCTTCCAAGTTTAGTCGCCGTGTGTCCCGAACAATATCGCACAACATTTCCACCTTTGAAAGAACTTGTACTCAACAAATGCTGCCAATTCGCTATCAAATCTATTGGTGATTTCATGACTCATCATTCAGTTACAAGATCTGTCGACCGTACAACCATCAAGGAATTGAGTGGGAACATGGAGCATTTTGTCGCTTTGGAAAGGTTGAAGGTAGGTAATTCCAATGTTGAAAGTATATGTCTTCTCAATGAAGTAAGTGAGCTCAATGAAGTAAGTGAGCTGCAAATGAACTTGGGGTTGCAAAACATTGAGTTAGATACTCTACCAATGTTGACATGTCTTTTTGTGGGTCTCAAAAATTCTTGTTACCTCAAAAACCTTACTAAGATGAAAATTAAGGGATGTGAAAAATTGAAATTTGTTTTCTCTACTTCTATAATAATGTGCCAACCGCAGTTGCTTCATATAAGAATTGAAGAATGCAAAGAGTTGAAGCATATGATTGAAGATGACTTGGAGAATAAAAATTCCTCAAATTTTATGGCTACAAAGACATGCTTCCCAAAGCTAAAAACACTTGTTGTAGCAAAGTGCAACAAGTTGAAATATGTTTTTCCAATCTCCCTGTGTAAAGAGCTTCCTGAGCTATATGTTCTGATGATAAGAGACGCAGATGAGCTAGAGGAAATATTTGTAAGTGAAGATGATCATCAGAAAAGCGAGATTCCGAATCTTAAATTTTTAGTATTTGAAAATCTGCCAAGTTTCTGGGATACCCAGAGAATTCAATATCAAGCTGTAAAATATCGTTTCATACAGAATTGTCAAAAACTCTCTCTGGCTTCATCAACAACAGCAGGCCTAAAAAATGAGGTTCATCGTTTAGTGTTTGACTACGATTATGAATTGTACGACGATTTGACGAAGCTGTTCAAGCAATTACACGGTGAGGCCAAAGGCCACGATACTTCTAATGAATATCCAAGTTCAGAAATCACCGAAGCTCGAGAAGCATCAAGACACGAGCCGACTTCTTCACAGAAAGAAATTGGACAAACACTAGTGACAGAGCATGGATTTGTTGAAAATGTTCCTCGTCATGAGATTCCATCAATAGCAATAATACCAACAAATTCAGAAGAGTTGATGAATGAACAACCAATGGAGCAACAACGTCCACTTGGTGAAACTGATGCTACCGTCAAACCTTTGCAGGAAAATACATTCGTGGGTTCAACGTCAGAAAAAAATGTAGCATCAACTCTTTCCACCATTTCAGAAACAACAAAGAATGAGCTTCCTATACAATTAGCTGCTTCTAAACATAAGGGTATTAAAATAAGTGTCGAAGAAGGAACCTCATCGGCTAATGCCAAAACAATAACATCACCACCTCATTTAAAATCAGTAGATGGTGATGTTCAAATAGCCATAGCTTCTCCTCAAATTGCCATAACAAAGCCTGCTACCATTCAAGATGTTGATGTTAAAATCTGTCAGGAAACTAGTAAGGCTAATGATGATCAAGTTGCTCTAAATGATGATGCTGTCATGAAAGCAAGCACAAATATTGAGCAACATTTACCTAAGGATGATGATATTGAAGATGGTGATGACCAAATAGCTAAGACTTCTTTTTCCATTGCCAATACAGAGACCAATGATCAAGTTTTTTTAGTTTCTCGAAATGATGATGCTTTCAAGAAAGTAAGATCAAATACTGAGGAACAGTTTCCTACGGATGATGATATATTAGTTTCCAAATCAAGACCCTCTTATATTGCATCTCAGTATCCTTTAAAACCTGTTGAAGGGGACCCTTCTCAAATAGTTGAAGATTTTTCTTGGGTTGTCACAAGGGAGGAGCTTGAGAATCTAGTTTCCAAGAACCATTTGGCTATTGAGAACTTGTCTTTGTTGACTGAATTCCTTGTTAAGCATCCGTCTGTTCTTCTAAGGGACACTTCATTGAGTAGCAGATACAAGGGTTATGCCTACAATTGCCTAGCTGAGCTATTGAAATTCCTCCAGACCCATAGTGTGTTAGACGTGTTAGGTTCAAGAAACTCTACATTTGTTGAGTTAATACAAGATGTGCGTAGATTTCCTTTTGACAAAGAATGGTTGGATGGTGTTGAAAAGCGCGCTTTGTTTCCTGGTTTACAAGTCTCTCAAGATGCATTGCAAAAATTGTTGAACTCAAAATACATTTTGACTCAACACGTGGAGGATCTTAAGCATCAATTGGCTTCCTCCGAAGCTGTTTTACAGAGCATCACTCAGCAGGAGGCACAATTTTTAGAAACTCGGCTGCTTTAA 5787 0.3729 MASFLIDLAKLYVEKCINGVIAESSYICCFTRIADDFEEERAWLEDATTTIKTRVDVATMRGEDVQANALFWEEEAEKLIQEDTKTNQKCFFGFCPHCIWRYRRGKELTNKKEQIKRLIETGEKLSIGFTARLPDVECYSPGQYIPFKSRESEYNELLGALKDDNNLIIGLHGMGGTGKTTMAIEVGKELKQSKQFTQIIHTTVSFSPDIRKIQDDIARPLGLKFDDCNESDRHKILWSRLTNGEKILLILDDVWGDINFDEIGIPDSDYLKGCRILVPTRNLLVCNRLRCSKTIQLHLLSEEDAWIMFQRHAGLSKISSKFFLLKGRKIATECKRLPIAIAVTASSLKGEKHREEWDMALYSFQKHMPMHGIDDDLVRIFSCFKFSYDNMKDEKAKRLFLLCSIFREDEKIPTEMLTRLGIGGGLFGEDYFRYEDVRNQAVVCKNKLLVSCLLLEANQSRVKMHDLVRDVAQWIADKEIQTVKLYDKNQKAMVERKMNIKYLLCEGKLKDLFSFKLDGSSLEILIATVHKDEGCHNVKIEVPNSFFENSTGLRVFHLIYDHYSNLSLSLPQSIQLLNNIRSLLFSRVDLGDISILVNLQSLETLDLDGCEIDELPHGITKLKKFRLLNLDYCKIARNNPFQVIEGCSSLEELYFRGSFNDFCREITFPELQRFYIDENSGSEDDLLLKCVSYVDNDEIFLSKTTLMYCMQKSEVLRLGRIVGEWRNIIPEMVPLDQGMNDLVELHLRCISQLKCLIDTMHTGYQVSKVFCKLVVLKLEGMDNLEELFNGSLSFDSLNSLEKLSIKDCTNLKSLFKCNLNLFNLKSVLLKRCPMLISLFQLSTAVSLVLLERLEINDCGCLEYIIDERNEEELRGEIVDDNDIASHGSLFQKLEILRIKKCPKIELILPLLSAGDLPALESITMKSCDLLKYIFDKNVELGSLKQLELDRIPNFIDIFPECNRTMTPSIKGTSSKPQAQSDPIKCNIFSWIDIYCCGKKNGHKSRSTEIPLVSEDKSPDNLMLQESNSYSLDYISIWERAQCLLRPSDILCNIKEITLRNILKMRSVFILSIAPKMLLETLTIRNCDELKHIIIDTGDHDNSGANNWGTVFPNLRKIEVEDCERLEDIIGHYTDGHQNHVEIHLHLPVLEGLYLENLPSLVAVCPEQYRTTFPPLKELVLNKCCQFAIKSIGDFMTHHSVTRSVDRTTIKELSGNMEHFVALERLKVGNSNVESICLLNEVSELNEVSELQMNLGLQNIELDTLPMLTCLFVGLKNSCYLKNLTKMKIKGCEKLKFVFSTSIIMCQPQLLHIRIEECKELKHMIEDDLENKNSSNFMATKTCFPKLKTLVVAKCNKLKYVFPISLCKELPELYVLMIRDADELEEIFVSEDDHQKSEIPNLKFLVFENLPSFWDTQRIQYQAVKYRFIQNCQKLSLASSTTAGLKNEVHRLVFDYDYELYDDLTKLFKQLHGEAKGHDTSNEYPSSEITEAREASRHEPTSSQKEIGQTLVTEHGFVENVPRHEIPSIAIIPTNSEELMNEQPMEQQRPLGETDATVKPLQENTFVGSTSEKNVASTLSTISETTKNELPIQLAASKHKGIKISVEEGTSSANAKTITSPPHLKSVDGDVQIAIASPQIAITKPATIQDVDVKICQETSKANDDQVALNDDAVMKASTNIEQHLPKDDDIEDGDDQIAKTSFSIANTETNDQVFLVSRNDDAFKKVRSNTEEQFPTDDDILVSKSRPSYIASQYPLKPVEGDPSQIVEDFSWVVTREELENLVSKNHLAIENLSLLTEFLVKHPSVLLRDTSLSSRYKGYAYNCLAELLKFLQTHSVLDVLGSRNSTFVELIQDVRRFPFDKEWLDGVEKRALFPGLQVSQDALQKLLNSKYILTQHVEDLKHQLASSEAVLQSITQQEAQFLETRLL* 1929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0890 1928 Gene3D - 299 387 IPR042197 -
Mtr3g0890 1928 MobiDBLite consensus disorder prediction 1474 1506 - -
Mtr3g0890 1928 Gene3D Ribonuclease Inhibitor 701 872 IPR032675 -
Mtr3g0890 1928 SUPERFAMILY L domain-like 457 955 - -
Mtr3g0890 1928 Coils Coil 1898 1918 - -
Mtr3g0890 1928 Pfam NB-ARC domain 153 390 IPR002182 GO:0043531
Mtr3g0890 1928 Gene3D - 388 474 IPR036388 -
Mtr3g0890 1928 PRINTS Disease resistance protein signature 168 183 - -
Mtr3g0890 1928 PRINTS Disease resistance protein signature 241 255 - -
Mtr3g0890 1928 PRINTS Disease resistance protein signature 334 348 - -
Mtr3g0890 1928 PRINTS Disease resistance protein signature 597 613 - -
Mtr3g0890 1928 Gene3D Ribonuclease Inhibitor 873 1297 IPR032675 -
Mtr3g0890 1928 SUPERFAMILY RNI-like 1089 1415 - -
Mtr3g0890 1928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 403 IPR027417 -
Mtr3g0890 1928 Gene3D Ribonuclease Inhibitor 532 685 IPR032675 -
Mtr3g0890 1928 PANTHER - 87 960 - -
Mtr3g0890 1928 PANTHER - 1328 1419 - -
Mtr3g0890 1928 Gene3D - 138 296 IPR027417 -
Mtr3g0890 1928 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1328 1419 - -
Mtr3g0890 1928 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 87 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0890 Mtr-Chr3 13200673 13217956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0890 169 640 WRKY Transcription Factor Family AT5G45050 22.056 3.03e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0890 - - mtr:MTR_3g435040 3341.59