Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0872 ATGAAGATGAAGAAGCTTAATTTGAGTAAGATCTATTCATTTAAATGTGGTAAAAAACCAAACTTTAAGAGAGAGCATTCACAGATTGGAAGACAAGGGTATTCTAGGGTTGTTTTATGTAATGAACAACAAGATAGATTTGAATCAGGTTTTAAGGATTATGCTGATAATTCTGTTAGGTCAACAAAATATACTTTTGCTACTTTCTTACCTAAGTCATTGTTTGAGCAGTTTAGGAGGGTAGCTAATTTCTTTTTCCTTGTTGCTGGTATCTTAGCTTTCACAAAACTTGCTCCTTATACTGCTGTTAGTGCTATTCTTCCTTTAGCTGTTATAGTTGGTGCAACTATGGTGAAGGAAGGTATTGAAGATTTTCGTCGGAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTATATGTCATAAAGGTGGTGGCAATTTTGAATCTACGGAGTGGAAGAATCTCAAGGTAGGAAATATAGTGAAGATAAAGAAGGATGAATTCTTCCCTGCCGACCTATTACTGATTTCGTCCAGTTACGAAGATGCAGTCTGCTACGTTGAAACCATGAACTTGGATGGTGAGACAAATTTGAAGCTAAAACAAGGTTTGGAAGTAACTTCTTCATTAAATGAGGAAGTTAAATTCCAAGATTTCAAAGCTGCTGTCAAATGTGAAGATCCAAATGCAAATTTGTACTCTTTTGTCGGGACATTGGATTTTGAAGGGCAAAAATATCCACTTTCTCCTCAGCAGCTTCTTCTCCGAGACTCAAAACTTCGTAATACAGACTTCATATTCGGAGCAGTCATCTTTACTGGTCACGACACGAAGGTTATTCAAAACTCCACTCCCCCTCCTTCGAAAAGGAGCAAAATCGAGAAGAAGATGGATAAGATTATCTACTTCTTATTTGGTGTTTTGTTTTTAATTGCCTTCATTGGATCTATTCTCTTTGGAATTGCAACTAAACGTGACTTGAACAACGGAATTATGAAAAGATGGTATCTGAGACCAGATGATTCCACCATTTTCTTTGATCCTAAAAGAGTCGCCGCAGCATCTGTTTTTCATTTCTTGACGGCCTTAATGCTATACAACTTCTTCATTCCCATCTCCTTGTATTTCTCAATAGAATTGGTTAAAGTCCTTCAAAGCATCTTCATTAATCAAGATATTAATATGTACTATGAAGAACTGGACAAACCGGCTCTTGCTCGTACTTCAAACTTGAATGAAGAACTCGGCCAAATTGACACAATCCTTTCTGATAAAACTGGAACTTTGACTTGCAACTCGATGGAGTTCATCAAATGTTCGGTTGCTGGGGTAGCTTATGGCCGTAGTGTCACAGAGGTTGAGCAAGCCATTGGTGGTAGGTCGGAACTGGAATCAATTGATATCAGGGAAGCTAATGATCGAAAAGAACCAATCAAAGGTTTTAATTTTATTGATGAAAGAATAATGAATGGAAACTGGATTAACGAGCCTCGTGCAGATGTTATACAGAATTTTTTTCGTTTATTGGCTGTTTGTCATACCGCCATGCCGGAAGTGGATGAGGAAACAGGAAGAGTTTCATATGAAGCTGAATCTCCTGATGAAGCGGCATTTGTGATTGCTGCAAGAGAAGTGGGTTTTAAATTCTACAAAAGGACCCAGAACAGTTTATCAATGATAGAGTTGGATCCGGTTTCTGGCAATGAAGTTGAAAGGACATACAAAATTCTCAATGTTTTAGAATTCAATAGTTCAAGGAAGCGAATGTCAGTGATAGTTAAAGATGAACACGGGAGAATTTTGTTGCTCTGTAAAGGCGCTGACAGTGTCATGTTTGAAAGGCTTGCCATTAATGGAAGGGAGTTTGAAGAAAAAACTTTGGAACATGTGAGTGAATATGCTGATGCAGGTCTAAGAACACTGATACTTGCCTATCGTGAACTTGATGAAGAAGAATACAACGAGTTTGACAAGAAATTTTCCGAAGCGAAAATTTCAATCACCGTGGATCATGAATCATTGATTGAGGAAATATCAGAAAAGATTGAGAGGAATCTAATCGTTCTCGGTGCCACTGCTGTAGAAGACAAGCTCCAAAATGGGGTTCCTGAGTGTATTGAAAAGCTTGCACAAGCTAGAATTAAGATATGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAACATTGGTTTTTCTTGTCGCTTGCTTCGACAAGGAATGAAACAGATTATAATTCATTTAGAAATGCCTGAAATTCAAGCATTAGAGAAGGATGGAGGAGACAAGATGGCTATCATGAAGGCATCAAGAGAAAGTGTGTATCTTCAGATATCTGAAGGTTCTAAACTGCTTTCTGCATCTAAAGGGAACTCTCAGCAAGCATTTGCTCTGATAATCGATGGAAAGTCACTTGTTTATGCTCTAGAGGATAATATAAAGAGCTCGTTTTTAGATCTCGCAACTCGCTGTGCATCTGTTATCTGTTGTCGCTCATCGCCAAAGCAGAAGGCACTGGTTACTAGATTGGTCAAAGAAGGAACTGGTAAAACAACATTAGCTATCGGTGATGGAGCTAATGACGTGGGAATGCTTCAAGAAGCTGATGTAGGTATTGGAATCAGTGGTGTTGAAGGAATGCAGGCCGTCATGGCTAGTGATATTGCAATTGCACAATTCCGGTATCTGGAAAGATTACTTCTTGTACATGGACATTGGTGCTACAGGAGGATGTCCACCATGATATGTTACTTTTTCTACAAGAATATTACATTTGGTTTCACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTTTCTATAGTGTCTTGTTTTCTTCACTTCCTGCCATTGCCCTTGGGGTCTTTGACCAAGATGTATCTGCTAGGTACTGCGTCAAGTTTCCTATCTTGTACCAAGAAGGTGTACAAAATGTCCTATTTAGGTGGCGCCGAATTCTAAGTTGGATGCTCAACGGATTCATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCAATAGGCCTTCAAGCCTTCGACGAGAATGGAAAAACCGCTGGAAAAGACATACTAGGAGCAACCATGTATACTTGTGTTGTTTGGGTTGTAAACCTACAGATGGCGCTCGCTGTGCGATACTTCACCTTGGTACAACATGTTGCCATTTGGGGTTCTATTGGTATTTGGTATTTATTCGCGTTTGCTTATGGATCGTTGCCTTCAAGCTTTTCAACAACTGCTTTCAAAGTCTTCGCTGAGACTCTTGCTCCATCGCCTTCCTTTTGGATTCTCACATTATTTGTCGCGGTTTCTTCACTTATACCATACTTTTCGTGCTCCACGATTAAAATGTGGTTGTTTCCTATGCATCATGAAAGGGTACAATGGATGAGGTATAAGGGCAAGAAGACCACTGATACTGAATAG 3465 0.3911 MKMKKLNLSKIYSFKCGKKPNFKREHSQIGRQGYSRVVLCNEQQDRFESGFKDYADNSVRSTKYTFATFLPKSLFEQFRRVANFFFLVAGILAFTKLAPYTAVSAILPLAVIVGATMVKEGIEDFRRKKQDIEVNNRRVICHKGGGNFESTEWKNLKVGNIVKIKKDEFFPADLLLISSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLNEEVKFQDFKAAVKCEDPNANLYSFVGTLDFEGQKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTPPPSKRSKIEKKMDKIIYFLFGVLFLIAFIGSILFGIATKRDLNNGIMKRWYLRPDDSTIFFDPKRVAAASVFHFLTALMLYNFFIPISLYFSIELVKVLQSIFINQDINMYYEELDKPALARTSNLNEELGQIDTILSDKTGTLTCNSMEFIKCSVAGVAYGRSVTEVEQAIGGRSELESIDIREANDRKEPIKGFNFIDERIMNGNWINEPRADVIQNFFRLLAVCHTAMPEVDEETGRVSYEAESPDEAAFVIAAREVGFKFYKRTQNSLSMIELDPVSGNEVERTYKILNVLEFNSSRKRMSVIVKDEHGRILLLCKGADSVMFERLAINGREFEEKTLEHVSEYADAGLRTLILAYRELDEEEYNEFDKKFSEAKISITVDHESLIEEISEKIERNLIVLGATAVEDKLQNGVPECIEKLAQARIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEMPEIQALEKDGGDKMAIMKASRESVYLQISEGSKLLSASKGNSQQAFALIIDGKSLVYALEDNIKSSFLDLATRCASVICCRSSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMLQEADVGIGISGVEGMQAVMASDIAIAQFRYLERLLLVHGHWCYRRMSTMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSFYSVLFSSLPAIALGVFDQDVSARYCVKFPILYQEGVQNVLFRWRRILSWMLNGFISAIIIFFFCTKAIGLQAFDENGKTAGKDILGATMYTCVVWVVNLQMALAVRYFTLVQHVAIWGSIGIWYLFAFAYGSLPSSFSTTAFKVFAETLAPSPSFWILTLFVAVSSLIPYFSCSTIKMWLFPMHHERVQWMRYKGKKTTDTE* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0872 1154 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Mtr3g0872 1154 Pfam Phospholipid-translocating ATPase N-terminal 48 105 IPR032631 -
Mtr3g0872 1154 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1152 - -
Mtr3g0872 1154 Gene3D - 686 896 IPR023214 -
Mtr3g0872 1154 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 658 IPR023299 GO:0000166
Mtr3g0872 1154 CDD P-type_ATPase_APLT_Dnf-like 56 1005 - -
Mtr3g0872 1154 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1152 - -
Mtr3g0872 1154 Pfam Cation transport ATPase (P-type) 513 615 - -
Mtr3g0872 1154 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Mtr3g0872 1154 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Mtr3g0872 1154 Gene3D - 529 664 IPR023299 GO:0000166
Mtr3g0872 1154 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1133 IPR023298 -
Mtr3g0872 1154 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Mtr3g0872 1154 SFLD p-type atpase 405 907 IPR044492 -
Mtr3g0872 1154 SUPERFAMILY HAD-like 418 911 IPR036412 -
Mtr3g0872 1154 SFLD C1.7: P-type atpase like 405 907 - -
Mtr3g0872 1154 SUPERFAMILY Calcium ATPase, transduction domain A 143 282 IPR008250 -
Mtr3g0872 1154 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 938 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr3g0872 1154 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 54 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr3g0872 1154 Gene3D - 113 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0872 Mtr-Chr3 12967114 12975053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0872 6 1148 Primary Pumps ATPases AT1G68710 71.271 0.0 1755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0872 K01530 - gmx:100798329 1884