Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0871 ATGTCCTCATATGTTTCCCTCTTTTCTCCAACTTCAATAATCAACGTTGAAGTTCTATCACATATTGGTGTCATATACTACACATTTATCAGTGGTTTGGAGATGGACTTGAATGGCATTTTACATGTTAAAAAGAAAGCTGCAACCATTGCGATTTCCGGGATCATCTTTCCAATGGTGATGGGACCACCGTTATACATTCTACATCGAAAATTTTATGGAAATGGTGATGGATCTAAACTTGAAAGATGCACAATGAAAGTTTATATAGAATGGACTTTAATTCTCACTGTGACAAGTTTTTCAATTGTAGCTCACACACTTTCTGAGCTAAAACTTCTTAATACTGGTCTTGGTCAAACTGCATTAACAGCATCTATGATCAGTGACACATATTCTTGGATTTTATACACAGTTATTCTTCCATTCTCAATTAATGGTGTAGGGGCAATATACTCAGTGTTAAGCACCGTCATATTTGTTTTCATTTGCATTTTTCTGGTGCGTCCGATCATTGTAAAGTTCATTGATCGCAAGACTGAAAGAGATGAATGGAACGATAAAGAATTACTCTTTCTTGTGATGGGGATTTTTGTTTGCTCATGCATAACAGATATTCTTGGAACACAAGACATTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCACGGTAAATTTGCTGATATCGTCACTACACTGACTGATGATTTTTGCGGCGGGTTTCTAGCACCGCTCTTCTTTAGTCGTAACGGAATGCGATTCTTTGTGAATTCCATATTTATCTATCCAACTTGGCCCTTAACACTTGTTATTATAATCTTGTTATGTGTTCCGAAGATTTTAAGCACTTTGTTTGCTACTTTCTTTTTTGGTATGCGTACTCAAGACAGTTTAGCTCTCGGCATGATTCTCAATACAAAGGGTGCCCTTGCACTGATAATGCTCAACACATCTTGGGATAGAAAAATTCTTTCTCCACCCACCCATGCTGTTTTAACTGCTGCAGTACTTTTAATGACTATAGTGGTGCCTCCCACAATCAATGTCATATATAAGCCGAGAAAGAGATTTGAGCAGAACAAGCTAAAGACTATACAAAAGCTTAGACTTGATGCAGAGCTTAGGATTCTTACATGTGTTCATAATGCTCGCCAGGCTACAGGGGTTATCAGCCTCGTTGAATCTTTCAATGCTACTAGAATTTCCCCTATACATGTTTTCGCACTTTACCTTATTGAACTCAAAGGACGTACTGGTGCACTTGTTGCCGCTCATATGGATAAGCCTAGTAACCAACCTGGAGCGCAAAATCTTACAAGATCCCAAGTAGAGCAAGAAAGCATTAATAATACATTTGAAGCACTTGGAGAGGCATATGATGCTGTCAGAGTCGAAACCTTAAATGTTGTGTCATCCTATTCAACCATTCATGAGGACATATATAACTCTGCTAATGAAAAACGCACAAGCATGATTATACTTCCATTCCATAAACACTTAAGTTCATTAGGTGCACTCGAAACAACTAGTGTTGCATACAAAGATATAAACCAGAATGTGATGCAAACTTCACCTTGCTCTGTGGGAATCTTTGTTGATCGTAATCTTGGGTCAATAACAAAAATGAACTTTCGAATTTGTATGATCTTTATTGGAGGTCCTGATGATCATGAAGCCTTAGCTGTTGCATGGAGGATGGTGGGGCACCCAGGAACCCGATTATCATTGGTTCGGATGCTCTTGTTTGACGAAGCAGCCGAAGTAAATATTATAAGTCATTATGAAGTACAAGGCATATTATCTGTTGTAATGGATAATGAGAAGCAGAAGGATCTAGACGAAGAATATGTAAATTCATTTAGACTGAAAGCAGTGAATAACAATGATTCTATATCATATTCGGAGGTTGATGTCCATTCAAGTGAAGATATTCCCACAATCCTCAATGATTTAGACAAATTTGGTTATGATTTATACATAGTTGGACAAGGGCATCATAGAAATGTTCGAGCCTTTTCAAGTTTATTGGAATGGTGTGATTGTCCAGAACTTGGAGTTATCGGGGATATGTTGGCATCAAACAATTTTAGTTCGGGTTCGTCTGTGCTCGTTGTGCAACAATATGGGTACGGAGGAATGGTTTCGGGAAATCAACCTAACCATGTGTCCACTAATAAAGATGGTTTTGAGGAACTTGTCGTATAG 2208 0.3813 MSSYVSLFSPTSIINVEVLSHIGVIYYTFISGLEMDLNGILHVKKKAATIAISGIIFPMVMGPPLYILHRKFYGNGDGSKLERCTMKVYIEWTLILTVTSFSIVAHTLSELKLLNTGLGQTALTASMISDTYSWILYTVILPFSINGVGAIYSVLSTVIFVFICIFLVRPIIVKFIDRKTERDEWNDKELLFLVMGIFVCSCITDILGTQDIVGAFVYGLILPHGKFADIVTTLTDDFCGGFLAPLFFSRNGMRFFVNSIFIYPTWPLTLVIIILLCVPKILSTLFATFFFGMRTQDSLALGMILNTKGALALIMLNTSWDRKILSPPTHAVLTAAVLLMTIVVPPTINVIYKPRKRFEQNKLKTIQKLRLDAELRILTCVHNARQATGVISLVESFNATRISPIHVFALYLIELKGRTGALVAAHMDKPSNQPGAQNLTRSQVEQESINNTFEALGEAYDAVRVETLNVVSSYSTIHEDIYNSANEKRTSMIILPFHKHLSSLGALETTSVAYKDINQNVMQTSPCSVGIFVDRNLGSITKMNFRICMIFIGGPDDHEALAVAWRMVGHPGTRLSLVRMLLFDEAAEVNIISHYEVQGILSVVMDNEKQKDLDEEYVNSFRLKAVNNNDSISYSEVDVHSSEDIPTILNDLDKFGYDLYIVGQGHHRNVRAFSSLLEWCDCPELGVIGDMLASNNFSSGSSVLVVQQYGYGGMVSGNQPNHVSTNKDGFEELVV* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0871 735 Pfam Sodium/hydrogen exchanger family 11 351 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g0871 735 PANTHER CATION/H+ EXCHANGER 3 1 722 - -
Mtr3g0871 735 Gene3D - 2 362 IPR038770 -
Mtr3g0871 735 PANTHER CATION/H + ANTIPORTER 1 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0871 Mtr-Chr3 12924959 12927265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0871 6 709 Antiporter Super Family AT2G13620 35.714 4.52e-164 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0871 - - gmx:100804266 1048.88