Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0870 ATGAGTGGCAAGAATGCACCTATATGCTATGATGTAAATGTGTTTGATCCCAGTCATCTATGGCAAACTCAAAATGTCCTTAAAAGCGAGTTACCGGAAATTGCAACTTCAATTGCATTTACGGTATTATTGTCGCTTCTCATCTTCTCCGTCCTAAAACCTCTTCATCAACCTCGGATTATTTCACATGTTGCTGTTGGTTTCTTACTAACTGGACCATTACTATTAGTGATAGCCCCATATTTTCCCATTTATATCGGAACTGCGGTGCTCAACATTGAAGTTCTATCGCATATTGGTGTCATATACTATGCATTTATCAGTGGTTTGGAGATGGACTTGAATAGCATTTTACATGTTAAAAAGAAAGATGCAACCATTGCGATTTCCGGGATCATCTTTCCGATGGTAATGGGGCCAATTTTATACAATCTACATCGATACTTTTATGGCAATGGTGATGGACCTAAACTCGAAGAAAGTACAATGAATGTTTATGTACAATGGACTTTAGTTCTCACTATGACAAGTTTTTCAATTGTAGCTCACACACTTTCCGAGCTCAAACTTCTTAATACCGGTCTTGGTCAGACGGCATTAACAACAGCTATGATCAGTGACACATATTCTTGGGTTTTATACACAATAACTCTTCCATTTTCAATTACTGGTAGTATTGTGGCAATATACTCAGTGTTAAGTACCGTCGTATTTGTTTTCATTTGCATTTTTGTGGTGCGTCCTATCATCGTAAAGGTCATTGATCGCAAGCTTGAAAGAGATGAATGGGATGATAAACAATTACTCTTTCTTCTGATGGGGATGTTTGTTTGCTCATATATAACAGGTATTCTTGGCACACAAGATATTGTCGGAGCTTTTGTGTACGGGTTGATTTTGCCTCATGGTAAATTTGCTGATATGGTCACGTCAATGACTGATGACTTTGGTGGCGAGTTTCTGGCCCCGCTCTTCTTTAGTCGCAATGGAATGCGCTTCATTGTGAAAGCCATATTCGTCCATCGAAACTGGCCCTTAACACTTGTGCTTATAATCTTGTTATGTGTTCCAAAGATTTTAAGCACTTTGTTTACCACTTTATTTTTTGGCATGCGTACTCAAGACAGTTTTGCTCTAGGCATGATTCTCAATACTAAGGGTGCCCTTGCATTGATAATGCTCAACACAGCTTGGGATAGACATATTTTTTCTGAACCCACTCATGCTGTTTTATCGGCTGCGGTCTTTTTAATGACTATTGTGGTTCCTCTCGTTATTAATGCGATATATAAGCCCAGGAAGAGATTTGAGCAGAACAAGCTAAAGACTATACAAAAGCTTAGACTTGATGCAGAACTTAGGATTCTAACATGTGTTCACAATACTCGCCACGCTATAGGGGTTATCAACCTCATTCAGTCTTTCAATGCCACTAGAATTTCCCCTATACATGTTTTTTCACTTTACCTTATTGAACTCAAAGGACGTACCGGTGCACTTGTTGCTGCTCATATGGATAAGCCTAGTGTGCAACCTGGAGCACAAAATCTTACCAGTTCCCAGGTAGAGCAAGAAAGCATTAATAATACATTTGAAGCATTTGGAGAGGCGTACGATGCTGTTAGAGTCCGAACCTTAAATGTTGTGTCATCCTATGCAACCATTCACGAGGACATATATAATTCAGCTAATGAAAAACACACAAGCATGATTATACTTCCATTCCATAAACACTTAAGTTCATTAGGTGCACTCGAAACAACTAGTGTTGCATACAAAGATATAAACCTGAATGTGATGCAAACTGCACCTTGCTCTGTGGGAATCTTTGTTGATCGTAATCTTGGGACATTACCGAAAATGAACTTTCGAATTTGTATGATATTTGTTGGTGGCCCTGATGACCATGAAGCCTTAACTGTTGCATGGAGGATGGCGGAGCACCCAAGAACTCGATTATCAGTGGTTCGAATGCTCCTGTTAGATGTAGCTGCTGAAGTAGACACTAAAAGTCATAATGAAACACAAGGAGTATTATCTGTTGTAATGGATAATGAGAAGCAGAAGGATCTAGACGAAGAATATGTAAATTCATTTAGACTGAAAGCAGTGAATAACAATGATTTTATATCCTATTCAGAGGTTGATGTCCATTCAGGTGAAGATATTCCCACAATCCTTGATGATTTAGACAAATTTGGTTGTGATTTATACATAGTTGGACAAGGGCATCATAGAAATGTTCGAGCCTTTTCAAGTTTATTGGAATGGTGTGATTGTCCAGAACTTGGAGTTATCGGGGATATGTTGGCATCAAACAATTTTAGTTCGGGTTCATCAGTGTTAGTTGTGCAACAATATGGGTACGGAGGAATAGTTTCGGGAAATCAACCTAATCATGTGTCCACTAATAAAGATGGTTTTGAGGAACTTGTCGTATAG 2442 0.3874 MSGKNAPICYDVNVFDPSHLWQTQNVLKSELPEIATSIAFTVLLSLLIFSVLKPLHQPRIISHVAVGFLLTGPLLLVIAPYFPIYIGTAVLNIEVLSHIGVIYYAFISGLEMDLNSILHVKKKDATIAISGIIFPMVMGPILYNLHRYFYGNGDGPKLEESTMNVYVQWTLVLTMTSFSIVAHTLSELKLLNTGLGQTALTTAMISDTYSWVLYTITLPFSITGSIVAIYSVLSTVVFVFICIFVVRPIIVKVIDRKLERDEWDDKQLLFLLMGMFVCSYITGILGTQDIVGAFVYGLILPHGKFADMVTSMTDDFGGEFLAPLFFSRNGMRFIVKAIFVHRNWPLTLVLIILLCVPKILSTLFTTLFFGMRTQDSFALGMILNTKGALALIMLNTAWDRHIFSEPTHAVLSAAVFLMTIVVPLVINAIYKPRKRFEQNKLKTIQKLRLDAELRILTCVHNTRHAIGVINLIQSFNATRISPIHVFSLYLIELKGRTGALVAAHMDKPSVQPGAQNLTSSQVEQESINNTFEAFGEAYDAVRVRTLNVVSSYATIHEDIYNSANEKHTSMIILPFHKHLSSLGALETTSVAYKDINLNVMQTAPCSVGIFVDRNLGTLPKMNFRICMIFVGGPDDHEALTVAWRMAEHPRTRLSVVRMLLLDVAAEVDTKSHNETQGVLSVVMDNEKQKDLDEEYVNSFRLKAVNNNDFISYSEVDVHSGEDIPTILDDLDKFGCDLYIVGQGHHRNVRAFSSLLEWCDCPELGVIGDMLASNNFSSGSSVLVVQQYGYGGIVSGNQPNHVSTNKDGFEELVV* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0870 813 Pfam Sodium/hydrogen exchanger family 40 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g0870 813 Gene3D - 33 440 IPR038770 -
Mtr3g0870 813 PANTHER CATION/H + ANTIPORTER 5 800 - -
Mtr3g0870 813 PANTHER CATION/H+ EXCHANGER 3 5 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0870 Mtr-Chr3 12916790 12919762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0870 8 787 Antiporter Super Family AT2G13620 34.426 1.17e-162 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0870 - - gmx:100804266 1101.66