Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0863 ATGTCAGAACAAGAATCTGATTCATGGAGTTTCATGTTGGTCTGTTTTTTGATCCTTTTCTCAGGTAAACTAGTTGCTGGAGATTCATTAGAAACAGATAAACATGTACTGTTGAATTTGAAATCCTATTTGGAAAATCAAACAGTTTCAAATAGAGGAGAGTATATAAGATGGAACAAGAACAATTCAAATCCTTGTGAATGGTCAGGAATATCTTGCAGACAAATCAAAGGTAAAAATAAATGGAGGGTTGTGAGTGTAGATATCTCAGCCAGTGATATTGCCGGTAAGATGTTTAAGAAATTCTCGAAGTTAAGTGAACTCACACATCTTGATGTCTCGAGGAACACTCTCTCCGGAGAGATTCCTGAGGATGTAAGGAAGTGTAAGAATCTTGTCTATCTTAATTTATCTCATAATATTCTTGAGGGAGAGATGAATTTGACAGGTTTGAGAAAGTTGCAAACATTGGATTTGTCGACGAATAGAATCAAGGGTGAACTTGAGGTGAATTTTCCTGATAATTGTGATAGTTTGGTTACTTTGAATGTTTCGGATAATCGGTTTTTTGGTAGGATTGATAAGTGTTTTGATGAGTGTTCAAAGTTGAAGTATTTGGATTTGAGTACAAATAATCTAAGTGGTGCTTTATGGAATGGAATTTCAAGGTTGAAAATGTTTTCAATTTCTGAGAATTTTCTAAGTGGGATTGTTCCTTCACAAGCTTTTCCAATGAATTGTAGTCTTGAAAAATTGGATCTCTCAGTTAATAAATTTTTCAGTAAACCTCCTAAGGAAGTTGCAAACTGCAAGAATTTAGAGATTCTCAATCTTTCTAGTAACAATTTTAGCGGTGAAATACCTCGTGAAATTGGTTCAATTACTCTTCTCAAATCATTGTTCTTGCAGAATAACACCTTCTCAAGAGATATTCCAAATACCCTTTTGAATTTGACCAATTTGTTTATCTTGGATATAAGCAGAAACAAATTTGGTGGTGAGATACAAGAGATTTTTGGGAAATTCAAGCAATTGAAGTTTCTTTTGTTGCACACAAATTTTTATGTTAAAGGATTGAATACATCTGGAATTTTCACATTGACCAATCTTACAAGACTAGAATTAAGCAACAACAACTTTTCAGGTCCGTTGCCGGCTGAAATTTCTCGAATGTCTGGTCTCATTTTCTTAACATTAAGCAACAACAATTTTAATGGAACTATTCCATCTGAATTAGGAAAGTTGAGTAAATTGCAAGCACTGGAACTTTCTTCCAATAGTTTCACTGGACAAATTCCACCAAGCCTAGGAAATTTGAAGTCTCTCTTGTGGTTAATGCTTGCAAACAATTCGTTAACAGGTGAAATTCCGCCCAAGTTAGGAAACTGTTCGAGTTTGTTATGGTTGAACCTTGCAAATAACAAACTCACTGGAAAATTTCCTTCTGAGTTAACCAAAATCGGAAGAAATGCTATGGAAACATTTGAGTCAAATCATAAGAACATGGTTGGAGTTGTTGCCGGAAATAGCGAATGCTTATCGATGAGAAGATGGATACCTGCTGATTACCCTCCATTCAGTTTTGTATATAGTATCCTAACCAGGAAAAATTGTCGATCCCTTTGGGATAGATTGCTCAAAGGATATGGAATTTTTCCTATGTGTGCATCTGAACCTTCTACCAGATCATCTCATAAATTTGGTTATGTTCAACTAAGTGGTAACCAAATTAGTGGTGAAATTCCTTCAGAAATTGGAACCATGTTAAATTTCAGTATGTTACATTTAGGCGACAACAAATTCAGCGGCGAATTCCCTCCTGAGATTGGTGGCTTACCACTTATAGTGTTGAATATGACTAGAAACAAGTTTTCAGGTGAAATTCCTAGGGAAATTGGTAACATGAAGTGTATGCAGAATCTTGATTTGTCTTGGAACAATTTCTCAGGTACATTTCCGACAAGTTTGATTAATTTGGATGAGCTTAGCAGGTTCAACATCTCATATAATCCTTTGTTATCTGGTACTGTACCGTTGTCTGGACATTTACTTACTTTCGACAAAGATTCATACTTAGGTGATACCCTCTTAGATTTTCCAAAGTTCTTTGATAACACTTTAGATGGAAAAAACAAAACCCTTCACATAAAAATGAAAAAAAACACAAAATGGTATCTCTGTGTTGCTCTAACCCTAGCTAGTTTGGTTTCTGGACTTCTTTTTCTAATCGTTTATTTCTTGGTGAAAAGTCCATCTTTGGAACAAGGAAAGTTTCTGAAGAATAAAAACCGAAATCATGATGATTTAGTTAGCTATGGATCTTCACAATGGTCATCTGATTCCTTCAAGATAATCCACTTGAACAATATAGTTTTCACACATGCCGACATCTTGGAAGCAACAAACAACTTCAAAGAGGAAAGAATCATAGGAAAAGGCGGTTTCGGAACGGTCTACAAAGGAGTTTTTCCAGATGGAAGAGAAGTGGCAGTCAAGAAGCTACAAAGGGAAGGAATCGAAGGCGAAAAAGAATTCAAAGCCGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGTTGGCCTCATCCAAATCTTGTCACACTCTATGGTTGGTGTCTATATGGTTCACAAAAGTTACTAGTATACGAGTACATAGGAGGTGGAAGTTTAGAAGAACTAGTAACCGATACAAAAAATTTAACCTATAAAAGGCGCTTAGAAGTCGCGATCGACGTGGCTAAAGCATTGGTTTATCTACACCATGAATGTTACCCTCCAATAGTTCATAGGGATGTGAAGGCTAGTAATGTGTTGCTTGACAAAGAAGGTAAAGCAAAGGTAACTGATTTCGGACTTGCTAGAATCGTCGATATTGGAGATAGTCATGTGAGCACAATCGTAGCCGGAACTGTTGGTTATGTTGCACCTGAATATGGACAAACATGGCATGCTACAACAAAAGGTGATGTTTATAGTTTTGGTGTGTTGATTATGGAGTTGGCAACTGGGAGAAGAGCTGTGGATGGAGGTGATGAATGTTTGGTTGAATGTGTTAGGCGTGTCATTGGTAGTGGTAAAAATGGATTGAGTAATTTTGGGGTAGTTGGTGGTGAAAAGGAGATGTTTGAGTTGCTTCAAGTTGGAGTAAAGTGCACAAATGATTTACCACAAAATAGGCCTAACATGAAAGAGGTTCTAGCCATGTTGGTCAAGATATTCAATCTTTATAGAAATTCAAATTATTGA 3243 0.3623 MSEQESDSWSFMLVCFLILFSGKLVAGDSLETDKHVLLNLKSYLENQTVSNRGEYIRWNKNNSNPCEWSGISCRQIKGKNKWRVVSVDISASDIAGKMFKKFSKLSELTHLDVSRNTLSGEIPEDVRKCKNLVYLNLSHNILEGEMNLTGLRKLQTLDLSTNRIKGELEVNFPDNCDSLVTLNVSDNRFFGRIDKCFDECSKLKYLDLSTNNLSGALWNGISRLKMFSISENFLSGIVPSQAFPMNCSLEKLDLSVNKFFSKPPKEVANCKNLEILNLSSNNFSGEIPREIGSITLLKSLFLQNNTFSRDIPNTLLNLTNLFILDISRNKFGGEIQEIFGKFKQLKFLLLHTNFYVKGLNTSGIFTLTNLTRLELSNNNFSGPLPAEISRMSGLIFLTLSNNNFNGTIPSELGKLSKLQALELSSNSFTGQIPPSLGNLKSLLWLMLANNSLTGEIPPKLGNCSSLLWLNLANNKLTGKFPSELTKIGRNAMETFESNHKNMVGVVAGNSECLSMRRWIPADYPPFSFVYSILTRKNCRSLWDRLLKGYGIFPMCASEPSTRSSHKFGYVQLSGNQISGEIPSEIGTMLNFSMLHLGDNKFSGEFPPEIGGLPLIVLNMTRNKFSGEIPREIGNMKCMQNLDLSWNNFSGTFPTSLINLDELSRFNISYNPLLSGTVPLSGHLLTFDKDSYLGDTLLDFPKFFDNTLDGKNKTLHIKMKKNTKWYLCVALTLASLVSGLLFLIVYFLVKSPSLEQGKFLKNKNRNHDDLVSYGSSQWSSDSFKIIHLNNIVFTHADILEATNNFKEERIIGKGGFGTVYKGVFPDGREVAVKKLQREGIEGEKEFKAEMKVLSGQEFGWPHPNLVTLYGWCLYGSQKLLVYEYIGGGSLEELVTDTKNLTYKRRLEVAIDVAKALVYLHHECYPPIVHRDVKASNVLLDKEGKAKVTDFGLARIVDIGDSHVSTIVAGTVGYVAPEYGQTWHATTKGDVYSFGVLIMELATGRRAVDGGDECLVECVRRVIGSGKNGLSNFGVVGGEKEMFELLQVGVKCTNDLPQNRPNMKEVLAMLVKIFNLYRNSNY* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0863 1080 Pfam Protein kinase domain 804 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0863 1080 CDD STKc_IRAK 810 1071 - -
Mtr3g0863 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Mtr3g0863 1080 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1074 - -
Mtr3g0863 1080 SUPERFAMILY Protein kinase-like (PK-like) 779 1069 IPR011009 -
Mtr3g0863 1080 Gene3D Ribonuclease Inhibitor 557 706 IPR032675 -
Mtr3g0863 1080 ProSitePatterns Protein kinases ATP-binding region signature. 810 833 IPR017441 GO:0005524
Mtr3g0863 1080 ProSiteProfiles Leucine-rich repeat profile. 131 152 IPR001611 GO:0005515
Mtr3g0863 1080 Gene3D Transferase(Phosphotransferase) domain 1 885 1079 - -
Mtr3g0863 1080 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1074 - -
Mtr3g0863 1080 SMART serkin_6 804 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0863 1080 Gene3D Ribonuclease Inhibitor 29 173 IPR032675 -
Mtr3g0863 1080 ProSiteProfiles Protein kinase domain profile. 804 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0863 1080 Gene3D Ribonuclease Inhibitor 174 245 IPR032675 -
Mtr3g0863 1080 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Mtr3g0863 1080 SUPERFAMILY L domain-like 221 677 - -
Mtr3g0863 1080 Gene3D Phosphorylase Kinase; domain 1 769 883 - -
Mtr3g0863 1080 SMART LRR_typ_2 439 463 IPR003591 -
Mtr3g0863 1080 SMART LRR_typ_2 367 391 IPR003591 -
Mtr3g0863 1080 SMART LRR_typ_2 105 129 IPR003591 -
Mtr3g0863 1080 SMART LRR_typ_2 294 318 IPR003591 -
Mtr3g0863 1080 SMART LRR_typ_2 415 438 IPR003591 -
Mtr3g0863 1080 SMART LRR_typ_2 151 175 IPR003591 -
Mtr3g0863 1080 Gene3D Ribonuclease Inhibitor 246 354 IPR032675 -
Mtr3g0863 1080 Pfam Leucine Rich Repeat 272 291 IPR001611 GO:0005515
Mtr3g0863 1080 Pfam Leucine Rich Repeat 417 439 IPR001611 GO:0005515
Mtr3g0863 1080 Gene3D Ribonuclease Inhibitor 355 517 IPR032675 -
Mtr3g0863 1080 SUPERFAMILY RNI-like 70 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0863 Mtr-Chr3 12748814 12753306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0863 84 1068 Receptor kinase-like Gene Family AT1G55610 32.854 3.04e-143 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mtr3g0863 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0863 - - mtr:MTR_3g437630 2120.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0863 3 12748814 12753306 Mtr3g0863 3 12748814 12753306 ECH