Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0844 ATGGCTGCAACTTTGGTGGGAGGAGCTTTTCTCTCTGCTACTGTTCAGACTTTAGTTGAGAAACTTGCTTCACAAGAGTTTTGTGATTACATCAGAAACAACAAGCTGAATTCCTCACTCTTGGCAGAGTTGGAAACAACACTACTCGCTCTTCAGGTGGTGCTGGATGATGCAGAACTGAAGCAAATCACCAACACTGCTGTCAAACAATGGTTGGATCAGCTGAAAGATGCAATCTATGATGCTGAGGATTTGCTTAACCAAATCAATTACGACTCCCTGCGATGTAAGGTGGAGAAGAAACAAGCTGAAAACATGACTAATCAGGTTTGGAACCTCTTTTCATCTCCTTTTAAAACTCTCTATGGAGAGATCAATTCACAAATGAAGATTATGTGTCAAAGGCTGCAGCTTTTTGCACAACAGAGAGATATCCTTGGCTTGCAAACTGTGAGAGGGAGAGTTTCTCTTAGAACGCCTTCAAGTTCAATGGTAAATAAATCTGTTATGGTTGGTAGGAAGGATGATAAAGAGAGACTCATTAGTATGTTGATATCTGACAGTGGCACTACCAATAGTAGTATTGGTGTGGTCGCAATTTTGGGTATGGGCGGTGTTGGCAAAACCACTCTTGCCCAACTTCTTTATAATGATAAAGAAGTTCAAGACCATTTTGATCTGAAAGTCTGGGTTTGTGTATCGGAGGATTTCGATATTTTGAGAGTAACTAAAACCATTCATGAATCTGTCACTTCAAGAGGTGGTGAAAGCAATAATCTTGATTCTCTTCGAGTTGAACTGAATCAAAACTTGAGGGATAAAAGATTTTTGTTGGTGCTGGACGATCTGTGGAATGATAGTTATAATGATTGGGATGAGTTAGTAACTCCATTGATTAACGGCAAAACAGGAAGTAGGGTGATCATCACAACACGCCAACAAAAAGTTGCGGAGGTTGCACACACGTTTCCTATTCACAAAGTAGATCCTCTATCAGATGATGACTGTTGGTCGTTACTTTCAAAGCATGCATTTGGAAGTGAAGTCCGTGGTGGTAGTAAATGCCCAAATCTGGAAGAAATTGGTAGAAAGATCGCCAAAAAATGTGGTGGGTTGCCCATAGCTGCTAAAACGCTCGGTGGAATTTTGCGTTCAAAGGTAGATGCTAAAGAGTGGAGTACAATTCTAAATAGTGACATATGGAACTTACCAAATGATAATATTTTACCTGCTTTGCGTCTAAGTTATCAATATCTTCCCTCACATTTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCGAAGGATTTTTCACTTGACAAGAAGGAATTGATTTTGTTATGGATGGCAGAAGGCTTCCTAGAGCATTCTCAGTGTAATAAAACAGCTGAGGAAGTAGGTCATGACTACTTTATTGAATTGTTATCCAGGTCCTTAATTCAACAATCAAATGATGATGGAAAAGAAAAATTTGTTATGCACGACCTTGTCAATGATTTAGCCTTAGTGGTGTCAGGAACAAGTTGCTTCAGGCTTGAATGTGGTGGTAACATGTCTAAAAATGTTCGTCATTTTTCATATAATCAAGGAGTGTATGACTTTCTCAAGAAGTTTGAAGTTTGA 1623 0.3906 MAATLVGGAFLSATVQTLVEKLASQEFCDYIRNNKLNSSLLAELETTLLALQVVLDDAELKQITNTAVKQWLDQLKDAIYDAEDLLNQINYDSLRCKVEKKQAENMTNQVWNLFSSPFKTLYGEINSQMKIMCQRLQLFAQQRDILGLQTVRGRVSLRTPSSSMVNKSVMVGRKDDKERLISMLISDSGTTNSSIGVVAILGMGGVGKTTLAQLLYNDKEVQDHFDLKVWVCVSEDFDILRVTKTIHESVTSRGGESNNLDSLRVELNQNLRDKRFLLVLDDLWNDSYNDWDELVTPLINGKTGSRVIITTRQQKVAEVAHTFPIHKVDPLSDDDCWSLLSKHAFGSEVRGGSKCPNLEEIGRKIAKKCGGLPIAAKTLGGILRSKVDAKEWSTILNSDIWNLPNDNILPALRLSYQYLPSHLKRCFAYCSIFPKDFSLDKKELILLWMAEGFLEHSQCNKTAEEVGHDYFIELLSRSLIQQSNDDGKEKFVMHDLVNDLALVVSGTSCFRLECGGNMSKNVRHFSYNQGVYDFLKKFEV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0844 540 PANTHER DISEASE RESISTANCE PROTEIN RP 59 521 IPR044974 GO:0006952
Mtr3g0844 540 Coils Coil 41 61 - -
Mtr3g0844 540 Gene3D - 14 131 - -
Mtr3g0844 540 Gene3D - 415 502 IPR036388 -
Mtr3g0844 540 Gene3D - 155 323 IPR027417 -
Mtr3g0844 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 430 IPR027417 -
Mtr3g0844 540 Pfam NB-ARC domain 174 397 IPR002182 GO:0043531
Mtr3g0844 540 Pfam Rx N-terminal domain 10 103 IPR041118 -
Mtr3g0844 540 PRINTS Disease resistance protein signature 197 212 - -
Mtr3g0844 540 PRINTS Disease resistance protein signature 270 284 - -
Mtr3g0844 540 PRINTS Disease resistance protein signature 369 383 - -
Mtr3g0844 540 PANTHER - 59 521 - -
Mtr3g0844 540 Gene3D - 330 414 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0844 Mtr-Chr3 12267179 12270499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0844 195 501 WRKY Transcription Factor Family AT5G45050 25.857 1.86e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0844 - - mtr:MTR_3g035840 1061.98