Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0843 ATGGCAGAGGTTGATGTTGGTCAGGCATTTCTTTCCCCTATCATTCAATTGATTTGTGAGAAATTAACTTCAACATATTTCAGAGACTATTTCCATGAAGGGCTGGTGAAAAAACTTGAAATCACACTGAAGTCTATCAATTATTTGCTGGATGACGCAGAGACTAAGCAGTACCAAAATCAACGCGTGGAGAATTGGCTTGATGATGTCAGTAATGAGGTATACGAATTAGAGCAACTATTGGATGTGATTGTTACTGACGCACAACGAAAGGGGAAGATAAGTCGTTTTCTTTCTGCTTTTATTAATCGATTTGAATCTAGAATTAAAGCTTCGCTGGAGAGGCTAGTGTTTCTTGCAGATCTAAAGTATGAACTGGGATTTGAAGTAGCAGCTAATCCCAGGCTAGAGTTTGGTGGAGTCACCCGCCCGTTTCCAACTGTATCTTTGGTTGATGAATCTCTGATACTTGGTAGAGAGCATGAGAAAGAGGAAATAATCGATTTTATACTTTCAGACAGGGATGGTGTCAACCGGGTACCCATAATCAGTATAGTGGGTCTGATGGGGATGGGTAAGACAGCCCTTGCTCAGCTTGTTTACAATGACCATAGGATACAGGAGCAGTTTGAATTTAAAGCTTGGGTCTATGTTCCAGAATCTTTTGGTCGTCTTCATCTCAACAAAGAAATAATTAATATTCAACTCCAACACTTGGTAGCACGGGATAATTATTTACTTGTTCTAGATGATGCCTGGATCAAAGATAGGAATATGTTGGAGTATTTACTACATTTTACTTTTCGAGGTAAGATTATCGTGACGACACATGATAATGAAGTAGCATCAGTCATGAGATCCAACCGGATAATTCATTTAAGGCAATTGGAGGAGAGTGACTCTTGGAGTTTATTTGTGAGACATGCTTTTGAAGGCAGGAATATGTTTGAATATCCAAATCTTGAATCCATCGGTATGAGAATAGTAGAAAAATGTGGGGGTTTGCCTTTAGCTCTGAAAACATTGGGGATTCTCTTGCAAAGAAAATTCTCTGAAATTAAATGGGTTAAGATATTGGAGACTGATTTGTGGCATTTCTCCGAAGGTGACAGCAACAGCATTTTTTCCATTCTGAGAATGAGTTACCTTAGCCTACCTTCCAATCTGAAGCATTGTTTTGCATATTGTTCTATATTTCCCAAGGGTTATGAGTTTGAAAAGGATGGATTAATCAAGCTTTGGATGGCACAAGGTTTGCTAAAGGGAATAGCCAAAAATGAAGAAGAGTTGGGTAATAAATTCTTCAATGATCTAGTGTCAATTTCGTTTTTCCAACAATCAGCAATTGTGCCATTCTGGGCTGGTAAGTACTATTTCATCATGCATGATCTTGTCCATGATTTAGCGACATCAATGTCAGGGGAATTCTGCTTACGAATAGAGGGTGTGAAAGTGCAATATATCCCTCAAAGGACACGTCACATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAAAGCAGATTCATAACATTAAAGGACTACGGAGTCTGATGGTAGAAGCACAAGGCTATGGTGATAAACGCTTTAAGATATCCACCAATGTGCAGTATAATTTGTATTCAAGACTACAATATTTACGGATGTTATCTTTCAAAGGTTGCAATCTCTCAGAGCTAGCTGATGAGATAAGAAACTTAAAGCTTCTGCGCTATCTAGACCTTTCTTACACCGAGATTACAAGCTTACCTGATTCCATTTGTATGTTGTATAATTTGCATACGCTCTTGCTGAAAGAATGTTTTAAACTACTTGAGCTCCCGCCAAATTTTTGCAAACTCATCAATTTACGTCATCTTAATTTGAAAGGCACGCATATTAAGAAGATGCCAAAGGAGATAAGTGAATTAATCAATCTTGAGATGCTGACTGATTTTGTTGTGGGAGAGCAACATGGATATGATATTAAGCAGTTGGCAGAACTCAACCACCTTAAAGGAAGGCTTCAAATTTCAGGATTGAAAAATGTGGCTCATCCAGCAGATGCTATGGCAGCAAATTTGAAAGATAAGAAACATTTAGAAGAATTAAGTTTGTCGTATGATGAATGGAGAGAAATGGATGGCTTAGTAACTGAAGCACGTGTCTCGGTCTTGGAAGCTCTTCAACCAAATAGACACCTCATGAGACTCACCATCAATGACTACAGAGGTAGTAGCTTTCCAAATTGGCTTGGGGATCATCATCTACCCAATTTAGTATCTCTTGAATTGTTGGGATGTAAACTCTGTTCCCAGTTGCCACCACTTGGGCAGTTGCCTTCTCTCGAGAAGCTTTCCATTTCTGGCTGTCATGGAATAGAGATCATTGGTTCAGAGTTTTGCGGCTATAATCCATCAAATGTTCCATTTAGATCCCTTGAAACTTTGCGGGTTGAGCATATGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCATTGCTTCAAGAGCTTTGTATAACGCATTGTCCCAAGTTGAAGAGTGCTCTGCCTCAGCACGTTCCTTGTTTGCAAAAGTTGGAGATTATTGATTGCCAAGAGTTGGAGGCTTCAATTCCTAATGCTGCTAATATCAGTGATATAGAACTAAAGAGATGTGATGGCATTTTTATAAATGAATTGCCATCAAGCTTGAAAAGGGCCATCCTTTGTGGAACTCATGTCATTGAAATCACCCTAGAGAAAATTCTAGTTAGTAGTCCCTTTCTTGAAGAACTGGAAGTTGAAGACTTCTTTGGTCCAAATCTAGAATGGTCCTCTTTGGATATGTGTAGTTGTAATTCCCTTCGCACTTTAACTATAACAGGTTGGCACTCTTCTTCCTTGCCTTTTGCACTACATTTGTTCACCAATCTTAATTCTCTCGTGTTGTACAATTGTCCGTGGCTGGAATCGTTTTTTTAG 2955 0.3898 MAEVDVGQAFLSPIIQLICEKLTSTYFRDYFHEGLVKKLEITLKSINYLLDDAETKQYQNQRVENWLDDVSNEVYELEQLLDVIVTDAQRKGKISRFLSAFINRFESRIKASLERLVFLADLKYELGFEVAANPRLEFGGVTRPFPTVSLVDESLILGREHEKEEIIDFILSDRDGVNRVPIISIVGLMGMGKTALAQLVYNDHRIQEQFEFKAWVYVPESFGRLHLNKEIINIQLQHLVARDNYLLVLDDAWIKDRNMLEYLLHFTFRGKIIVTTHDNEVASVMRSNRIIHLRQLEESDSWSLFVRHAFEGRNMFEYPNLESIGMRIVEKCGGLPLALKTLGILLQRKFSEIKWVKILETDLWHFSEGDSNSIFSILRMSYLSLPSNLKHCFAYCSIFPKGYEFEKDGLIKLWMAQGLLKGIAKNEEELGNKFFNDLVSISFFQQSAIVPFWAGKYYFIMHDLVHDLATSMSGEFCLRIEGVKVQYIPQRTRHIWCCLDLEDGDRKLKQIHNIKGLRSLMVEAQGYGDKRFKISTNVQYNLYSRLQYLRMLSFKGCNLSELADEIRNLKLLRYLDLSYTEITSLPDSICMLYNLHTLLLKECFKLLELPPNFCKLINLRHLNLKGTHIKKMPKEISELINLEMLTDFVVGEQHGYDIKQLAELNHLKGRLQISGLKNVAHPADAMAANLKDKKHLEELSLSYDEWREMDGLVTEARVSVLEALQPNRHLMRLTINDYRGSSFPNWLGDHHLPNLVSLELLGCKLCSQLPPLGQLPSLEKLSISGCHGIEIIGSEFCGYNPSNVPFRSLETLRVEHMSEWKEWLCLEGFPLLQELCITHCPKLKSALPQHVPCLQKLEIIDCQELEASIPNAANISDIELKRCDGIFINELPSSLKRAILCGTHVIEITLEKILVSSPFLEELEVEDFFGPNLEWSSLDMCSCNSLRTLTITGWHSSSLPFALHLFTNLNSLVLYNCPWLESFF* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0843 984 Gene3D - 150 293 IPR027417 -
Mtr3g0843 984 SUPERFAMILY L domain-like 461 981 - -
Mtr3g0843 984 SMART LRR_typ_2 616 639 IPR003591 -
Mtr3g0843 984 SMART LRR_typ_2 569 592 IPR003591 -
Mtr3g0843 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 396 IPR027417 -
Mtr3g0843 984 Coils Coil 36 56 - -
Mtr3g0843 984 Gene3D Ribonuclease Inhibitor 505 905 IPR032675 -
Mtr3g0843 984 Gene3D - 22 115 - -
Mtr3g0843 984 Pfam Rx N-terminal domain 10 92 IPR041118 -
Mtr3g0843 984 PRINTS Disease resistance protein signature 182 197 - -
Mtr3g0843 984 PRINTS Disease resistance protein signature 239 253 - -
Mtr3g0843 984 PRINTS Disease resistance protein signature 332 346 - -
Mtr3g0843 984 PRINTS Disease resistance protein signature 773 789 - -
Mtr3g0843 984 Pfam NB-ARC domain 160 382 IPR002182 GO:0043531
Mtr3g0843 984 ProSiteProfiles Leucine-rich repeat profile. 571 592 IPR001611 GO:0005515
Mtr3g0843 984 Gene3D - 295 381 IPR042197 -
Mtr3g0843 984 PANTHER OS05G0414200 PROTEIN 26 978 - -
Mtr3g0843 984 PANTHER DISEASE RESISTANCE PROTEIN RP 26 978 IPR044974 GO:0006952
Mtr3g0843 984 Gene3D - 382 472 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0843 Mtr-Chr3 12247740 12261816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0843 177 792 WRKY Transcription Factor Family AT5G45050 23.572 7.64e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0843 - - mtr:MTR_3g035810 1896.32