Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0837 ATGTCACGGCGAGGTACTGCAGAAAAAAAAACCGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTATGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCTATGAAAAGGATTCAACAAAAGACAAAAACAAATCCACTATATGTTTTACGTCAAGCAATACGTGGCGTAACTCCCGATATAGCAGTAAAAACAAAAACAAGACGCGTAAGCGGATCGAATAAAAAAGTTCCCGTTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGCGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGCAAAAAGCAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA 474 0.3945 MSRRGTAEKKTAKSDPIYRNRLVNMLVNRIMKHGKKSLAYQIIYRAMKRIQQKTKTNPLYVLRQAIRGVTPDIAVKTKTRRVSGSNKKVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKQETHRMAEANRAFAHFR* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0837 157 ProSitePatterns Ribosomal protein S7 signature. 20 46 IPR020606 GO:0003723|GO:0003735|GO:0006412
Mtr3g0837 157 PANTHER RIBOSOMAL PROTEIN S7 1 157 IPR000235 GO:0006412
Mtr3g0837 157 Gene3D Ribosomal protein S7 domain 1 157 IPR036823 -
Mtr3g0837 157 Pfam Ribosomal protein S7p/S5e 1 151 IPR023798 -
Mtr3g0837 157 CDD uS7_Chloroplast 9 156 - -
Mtr3g0837 157 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 1 157 - -
Mtr3g0837 157 TIGRFAM rpsG_bact: ribosomal protein uS7 3 157 IPR005717 GO:0003735|GO:0006412|GO:0015935
Mtr3g0837 157 Hamap 30S ribosomal protein S7 [rpsG]. 1 157 IPR005717 GO:0003735|GO:0006412|GO:0015935
Mtr3g0837 157 SUPERFAMILY Ribosomal protein S7 1 151 IPR036823 -
Mtr3g0837 157 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 157 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0837 Mtr-Chr3 12205548 12206300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0837 22 151 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 34.043 5.60e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0837 K02992 - gmx:3989376 278.87