Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0825 ATGGATGATGGAAATTCTGAGGTTTCTGATAAACTTTCAGATAATGTTCTATTTTCAAATCCAGAATCATGTAGCAATTTTCAAACTTCAACATCTTTAAACACAGTTACTGAATTGTCTAATAGCACCACAAAAACATGCATTCACACTCACACTTGTAATCCATCTGGTCCTGATGATGTTTATCACACACACACATGTTTTCACACACATACTCAAGTTTTTGCATCTGAAGATGACACAAATTCAATACCAAAAAGGACTTCTGGAAATAGAGAAGCTGTTAAAAAGTATAGGGAGAAGAAAAAGGCAGAAACAGCTTATTTGGAAGAAGAAGTTAAGAAATTGAAACTTGTGAACCAACAACTTCTAAGGAAACTACAAGGGCAGGCACTACTTGAAGCTGAATTGTTAAGGTTAAGGAACATTTTGGTACAGCTTAAGGGAAAAGTTGACAATGAATTAGGTTCTTTCCCTTTTGAGAAAAATCTGCCATGTTTGCATCCACATGCAGATCATCATCTAAGGTTAACACTTGTGCATATTGCAAACCACATGAGTAGTACTAAAGTTTTTGACCAATTGTTATTTATGCCACTTTAG 603 0.3483 MDDGNSEVSDKLSDNVLFSNPESCSNFQTSTSLNTVTELSNSTTKTCIHTHTCNPSGPDDVYHTHTCFHTHTQVFASEDDTNSIPKRTSGNREAVKKYREKKKAETAYLEEEVKKLKLVNQQLLRKLQGQALLEAELLRLRNILVQLKGKVDNELGSFPFEKNLPCLHPHADHHLRLTLVHIANHMSSTKVFDQLLFMPL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0825 200 SUPERFAMILY Leucine zipper domain 86 129 IPR046347 GO:0003700|GO:0006355
Mtr3g0825 200 Pfam Basic region leucine zipper 86 134 IPR004827 GO:0003700|GO:0006355
Mtr3g0825 200 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 165 - -
Mtr3g0825 200 PANTHER BASIC LEUCINE ZIPPER 23 1 165 - -
Mtr3g0825 200 SMART brlzneu 78 146 IPR004827 GO:0003700|GO:0006355
Mtr3g0825 200 CDD bZIP 91 128 - -
Mtr3g0825 200 Gene3D - 71 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0825 Mtr-Chr3 11887679 11889165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0825 41 162 bZIP Transcription Factor Family AT3G51960 54.688 1.52e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g0825 bZIP_2 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0825 K25785 - gmx:100527780 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0825 3 11887679 11889165 Mtr3g0825 3 11887679 11889165 ECH